Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb4Q91XZ6 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb4Q91XZ6 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb4Q91XZ6 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb4Q91XZ6 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb4Q91XZ6 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb4Q91XZ6 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb4Q91XZ6 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb4Q91XZ6 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb4Q91XZ6 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb4Q91XZ6 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb4Q91XZ6 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb4Q91XZ6 Matn2-206ENSMUST00000228570 2798 ntBASIC14.66□□□□□ -0.06
Pcdhb4Q91XZ6 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb4Q91XZ6 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb4Q91XZ6 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb4Q91XZ6 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb4Q91XZ6 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Pcdhb4Q91XZ6 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.66□□□□□ -0.06
Pcdhb4Q91XZ6 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb4Q91XZ6 Mir8098-201ENSMUST00000184011 137 ntBASIC14.66□□□□□ -0.06
Pcdhb4Q91XZ6 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb4Q91XZ6 Gm10060-201ENSMUST00000212002 111 ntBASIC14.66□□□□□ -0.06
Pcdhb4Q91XZ6 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb4Q91XZ6 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb4Q91XZ6 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Pcdhb4Q91XZ6 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb4Q91XZ6 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb4Q91XZ6 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb4Q91XZ6 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb4Q91XZ6 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb4Q91XZ6 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb4Q91XZ6 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb4Q91XZ6 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb4Q91XZ6 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb4Q91XZ6 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb4Q91XZ6 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb4Q91XZ6 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb4Q91XZ6 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb4Q91XZ6 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb4Q91XZ6 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Pcdhb4Q91XZ6 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb4Q91XZ6 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb4Q91XZ6 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb4Q91XZ6 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb4Q91XZ6 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb4Q91XZ6 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb4Q91XZ6 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdhb4Q91XZ6 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.65□□□□□ -0.06
Pcdhb4Q91XZ6 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb4Q91XZ6 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.65□□□□□ -0.06
Pcdhb4Q91XZ6 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb4Q91XZ6 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdhb4Q91XZ6 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb4Q91XZ6 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Pcdhb4Q91XZ6 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb4Q91XZ6 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb4Q91XZ6 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Pcdhb4Q91XZ6 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb4Q91XZ6 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Pcdhb4Q91XZ6 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 Gm28659-201ENSMUST00000188013 759 ntBASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 Gm43767-201ENSMUST00000198933 381 ntBASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb4Q91XZ6 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms