Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Gm7461-201ENSMUST00000058918 827 ntBASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhga3Q91XY5 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Gm4899-201ENSMUST00000178708 719 ntBASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhga3Q91XY5 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 Gm27628-201ENSMUST00000184911 107 ntBASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms