Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TraipQ8VIG6 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TraipQ8VIG6 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TraipQ8VIG6 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.65■□□□□ 0.1
TraipQ8VIG6 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TraipQ8VIG6 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
TraipQ8VIG6 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.64■□□□□ 0.09
TraipQ8VIG6 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TraipQ8VIG6 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
TraipQ8VIG6 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TraipQ8VIG6 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TraipQ8VIG6 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TraipQ8VIG6 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TraipQ8VIG6 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TraipQ8VIG6 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TraipQ8VIG6 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC15.64■□□□□ 0.09
TraipQ8VIG6 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
TraipQ8VIG6 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TraipQ8VIG6 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TraipQ8VIG6 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TraipQ8VIG6 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TraipQ8VIG6 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TraipQ8VIG6 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TraipQ8VIG6 Gm12151-201ENSMUST00000121374 290 ntBASIC15.64■□□□□ 0.09
TraipQ8VIG6 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TraipQ8VIG6 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TraipQ8VIG6 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TraipQ8VIG6 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TraipQ8VIG6 Gm27631-201ENSMUST00000184163 466 ntBASIC15.64■□□□□ 0.09
TraipQ8VIG6 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.64■□□□□ 0.09
TraipQ8VIG6 Shd-206ENSMUST00000225145 998 ntBASIC15.64■□□□□ 0.09
TraipQ8VIG6 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TraipQ8VIG6 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TraipQ8VIG6 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TraipQ8VIG6 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TraipQ8VIG6 BC037039-201ENSMUST00000192003 2205 ntBASIC15.64■□□□□ 0.09
TraipQ8VIG6 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TraipQ8VIG6 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TraipQ8VIG6 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TraipQ8VIG6 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TraipQ8VIG6 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TraipQ8VIG6 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
TraipQ8VIG6 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TraipQ8VIG6 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TraipQ8VIG6 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TraipQ8VIG6 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TraipQ8VIG6 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TraipQ8VIG6 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TraipQ8VIG6 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
TraipQ8VIG6 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TraipQ8VIG6 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TraipQ8VIG6 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TraipQ8VIG6 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TraipQ8VIG6 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TraipQ8VIG6 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TraipQ8VIG6 Gm12428-201ENSMUST00000119844 727 ntBASIC15.63■□□□□ 0.09
TraipQ8VIG6 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.63■□□□□ 0.09
TraipQ8VIG6 Gm10275-202ENSMUST00000168697 495 ntBASIC15.63■□□□□ 0.09
TraipQ8VIG6 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC15.63■□□□□ 0.09
TraipQ8VIG6 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC15.63■□□□□ 0.09
TraipQ8VIG6 Gm45453-201ENSMUST00000211758 853 ntBASIC15.63■□□□□ 0.09
TraipQ8VIG6 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.63■□□□□ 0.09
TraipQ8VIG6 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TraipQ8VIG6 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TraipQ8VIG6 Gm10275-201ENSMUST00000092620 635 ntBASIC15.63■□□□□ 0.09
TraipQ8VIG6 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TraipQ8VIG6 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.63■□□□□ 0.09
TraipQ8VIG6 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TraipQ8VIG6 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TraipQ8VIG6 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TraipQ8VIG6 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TraipQ8VIG6 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.63■□□□□ 0.09
TraipQ8VIG6 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
TraipQ8VIG6 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TraipQ8VIG6 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TraipQ8VIG6 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TraipQ8VIG6 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TraipQ8VIG6 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TraipQ8VIG6 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.62■□□□□ 0.09
TraipQ8VIG6 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TraipQ8VIG6 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TraipQ8VIG6 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
TraipQ8VIG6 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TraipQ8VIG6 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TraipQ8VIG6 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TraipQ8VIG6 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TraipQ8VIG6 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TraipQ8VIG6 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.62■□□□□ 0.09
TraipQ8VIG6 AA619741-201ENSMUST00000195095 646 ntBASIC15.62■□□□□ 0.09
TraipQ8VIG6 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TraipQ8VIG6 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TraipQ8VIG6 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TraipQ8VIG6 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TraipQ8VIG6 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TraipQ8VIG6 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TraipQ8VIG6 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TraipQ8VIG6 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TraipQ8VIG6 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TraipQ8VIG6 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TraipQ8VIG6 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms