Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps4aQ8VEJ9 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps4aQ8VEJ9 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps4aQ8VEJ9 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps4aQ8VEJ9 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps4aQ8VEJ9 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vps4aQ8VEJ9 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.32□□□□□ -0.12
Vps4aQ8VEJ9 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.32□□□□□ -0.12
Vps4aQ8VEJ9 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vps4aQ8VEJ9 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 Chchd1-203ENSMUST00000224633 557 ntBASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vps4aQ8VEJ9 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps4aQ8VEJ9 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps4aQ8VEJ9 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps4aQ8VEJ9 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.3□□□□□ -0.12
Vps4aQ8VEJ9 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vps4aQ8VEJ9 Celf4-206ENSMUST00000224553 1729 ntBASIC14.3□□□□□ -0.12
Vps4aQ8VEJ9 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps4aQ8VEJ9 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps4aQ8VEJ9 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps4aQ8VEJ9 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps4aQ8VEJ9 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.3□□□□□ -0.12
Vps4aQ8VEJ9 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.3□□□□□ -0.12
Vps4aQ8VEJ9 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.3□□□□□ -0.12
Vps4aQ8VEJ9 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.3□□□□□ -0.12
Vps4aQ8VEJ9 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.3□□□□□ -0.12
Vps4aQ8VEJ9 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.3□□□□□ -0.12
Vps4aQ8VEJ9 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps4aQ8VEJ9 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps4aQ8VEJ9 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.3□□□□□ -0.12
Vps4aQ8VEJ9 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Vps4aQ8VEJ9 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.3□□□□□ -0.12
Vps4aQ8VEJ9 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps4aQ8VEJ9 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps4aQ8VEJ9 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vps4aQ8VEJ9 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps4aQ8VEJ9 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vps4aQ8VEJ9 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vps4aQ8VEJ9 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Vps4aQ8VEJ9 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4aQ8VEJ9 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Vps4aQ8VEJ9 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4aQ8VEJ9 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Vps4aQ8VEJ9 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4aQ8VEJ9 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Vps4aQ8VEJ9 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4aQ8VEJ9 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.29□□□□□ -0.12
Vps4aQ8VEJ9 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4aQ8VEJ9 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4aQ8VEJ9 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Vps4aQ8VEJ9 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4aQ8VEJ9 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4aQ8VEJ9 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4aQ8VEJ9 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4aQ8VEJ9 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4aQ8VEJ9 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4aQ8VEJ9 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4aQ8VEJ9 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms