Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf8Q8VC56 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf8Q8VC56 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf8Q8VC56 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf8Q8VC56 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rnf8Q8VC56 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf8Q8VC56 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf8Q8VC56 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.22□□□□□ -0.13
Rnf8Q8VC56 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf8Q8VC56 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rnf8Q8VC56 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rnf8Q8VC56 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf8Q8VC56 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.22□□□□□ -0.13
Rnf8Q8VC56 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf8Q8VC56 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.22□□□□□ -0.13
Rnf8Q8VC56 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf8Q8VC56 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf8Q8VC56 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf8Q8VC56 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.22□□□□□ -0.13
Rnf8Q8VC56 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.22□□□□□ -0.13
Rnf8Q8VC56 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.22□□□□□ -0.13
Rnf8Q8VC56 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf8Q8VC56 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf8Q8VC56 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.22□□□□□ -0.13
Rnf8Q8VC56 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf8Q8VC56 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.22□□□□□ -0.13
Rnf8Q8VC56 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf8Q8VC56 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf8Q8VC56 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Rnf8Q8VC56 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf8Q8VC56 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf8Q8VC56 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf8Q8VC56 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Rnf8Q8VC56 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf8Q8VC56 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.22□□□□□ -0.13
Rnf8Q8VC56 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf8Q8VC56 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.22□□□□□ -0.13
Rnf8Q8VC56 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf8Q8VC56 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Rnf8Q8VC56 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Rnf8Q8VC56 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf8Q8VC56 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf8Q8VC56 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rnf8Q8VC56 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf8Q8VC56 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Rnf8Q8VC56 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf8Q8VC56 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf8Q8VC56 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf8Q8VC56 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.21□□□□□ -0.13
Rnf8Q8VC56 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf8Q8VC56 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf8Q8VC56 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf8Q8VC56 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf8Q8VC56 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rnf8Q8VC56 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Rnf8Q8VC56 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Rnf8Q8VC56 Gm18489-201ENSMUST00000172565 551 ntBASIC14.21□□□□□ -0.13
Rnf8Q8VC56 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.21□□□□□ -0.13
Rnf8Q8VC56 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf8Q8VC56 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf8Q8VC56 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf8Q8VC56 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf8Q8VC56 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf8Q8VC56 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rnf8Q8VC56 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rnf8Q8VC56 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf8Q8VC56 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf8Q8VC56 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Rnf8Q8VC56 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf8Q8VC56 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf8Q8VC56 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf8Q8VC56 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf8Q8VC56 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf8Q8VC56 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rnf8Q8VC56 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf8Q8VC56 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf8Q8VC56 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf8Q8VC56 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.2□□□□□ -0.14
Rnf8Q8VC56 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf8Q8VC56 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf8Q8VC56 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rnf8Q8VC56 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf8Q8VC56 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf8Q8VC56 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf8Q8VC56 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf8Q8VC56 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf8Q8VC56 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rnf8Q8VC56 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.2□□□□□ -0.14
Rnf8Q8VC56 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.2□□□□□ -0.14
Rnf8Q8VC56 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.2□□□□□ -0.14
Rnf8Q8VC56 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.2□□□□□ -0.14
Rnf8Q8VC56 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.2□□□□□ -0.14
Rnf8Q8VC56 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Rnf8Q8VC56 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.2□□□□□ -0.14
Rnf8Q8VC56 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf8Q8VC56 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.2□□□□□ -0.14
Rnf8Q8VC56 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf8Q8VC56 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf8Q8VC56 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rnf8Q8VC56 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms