Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpp40Q8R1F9 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpp40Q8R1F9 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.77■□□□□ 0.12
Rpp40Q8R1F9 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rpp40Q8R1F9 Gm24158-201ENSMUST00000175263 71 ntBASIC15.77■□□□□ 0.12
Rpp40Q8R1F9 Gm25948-201ENSMUST00000175334 112 ntBASIC15.77■□□□□ 0.12
Rpp40Q8R1F9 Gm10253-201ENSMUST00000194270 940 ntBASIC15.77■□□□□ 0.12
Rpp40Q8R1F9 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC15.77■□□□□ 0.12
Rpp40Q8R1F9 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpp40Q8R1F9 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpp40Q8R1F9 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpp40Q8R1F9 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Rpp40Q8R1F9 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rpp40Q8R1F9 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rpp40Q8R1F9 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rpp40Q8R1F9 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rpp40Q8R1F9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.77■□□□□ 0.11
Rpp40Q8R1F9 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.77■□□□□ 0.11
Rpp40Q8R1F9 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rpp40Q8R1F9 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.77■□□□□ 0.11
Rpp40Q8R1F9 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rpp40Q8R1F9 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpp40Q8R1F9 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpp40Q8R1F9 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpp40Q8R1F9 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpp40Q8R1F9 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rpp40Q8R1F9 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpp40Q8R1F9 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpp40Q8R1F9 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Rpp40Q8R1F9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpp40Q8R1F9 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpp40Q8R1F9 Gm13616-201ENSMUST00000120600 222 ntBASIC15.76■□□□□ 0.11
Rpp40Q8R1F9 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rpp40Q8R1F9 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.76■□□□□ 0.11
Rpp40Q8R1F9 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.76■□□□□ 0.11
Rpp40Q8R1F9 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.76■□□□□ 0.11
Rpp40Q8R1F9 Gm5779-201ENSMUST00000218467 910 ntBASIC15.76■□□□□ 0.11
Rpp40Q8R1F9 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpp40Q8R1F9 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.76■□□□□ 0.11
Rpp40Q8R1F9 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Rpp40Q8R1F9 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpp40Q8R1F9 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpp40Q8R1F9 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpp40Q8R1F9 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpp40Q8R1F9 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpp40Q8R1F9 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpp40Q8R1F9 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rpp40Q8R1F9 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rpp40Q8R1F9 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpp40Q8R1F9 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpp40Q8R1F9 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Rpp40Q8R1F9 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpp40Q8R1F9 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpp40Q8R1F9 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpp40Q8R1F9 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.75■□□□□ 0.11
Rpp40Q8R1F9 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpp40Q8R1F9 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpp40Q8R1F9 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpp40Q8R1F9 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpp40Q8R1F9 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpp40Q8R1F9 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpp40Q8R1F9 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.75■□□□□ 0.11
Rpp40Q8R1F9 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rpp40Q8R1F9 Gm9824-201ENSMUST00000178707 561 ntBASIC15.75■□□□□ 0.11
Rpp40Q8R1F9 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.75■□□□□ 0.11
Rpp40Q8R1F9 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.75■□□□□ 0.11
Rpp40Q8R1F9 Gm37230-201ENSMUST00000194491 818 ntBASIC15.75■□□□□ 0.11
Rpp40Q8R1F9 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.75■□□□□ 0.11
Rpp40Q8R1F9 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rpp40Q8R1F9 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpp40Q8R1F9 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpp40Q8R1F9 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpp40Q8R1F9 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpp40Q8R1F9 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpp40Q8R1F9 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpp40Q8R1F9 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.75■□□□□ 0.11
Rpp40Q8R1F9 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
Rpp40Q8R1F9 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
Rpp40Q8R1F9 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpp40Q8R1F9 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Rpp40Q8R1F9 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpp40Q8R1F9 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpp40Q8R1F9 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpp40Q8R1F9 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpp40Q8R1F9 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpp40Q8R1F9 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Rpp40Q8R1F9 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpp40Q8R1F9 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpp40Q8R1F9 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpp40Q8R1F9 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Rpp40Q8R1F9 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpp40Q8R1F9 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.74■□□□□ 0.11
Rpp40Q8R1F9 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rpp40Q8R1F9 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpp40Q8R1F9 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.74■□□□□ 0.11
Rpp40Q8R1F9 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.74■□□□□ 0.11
Rpp40Q8R1F9 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpp40Q8R1F9 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rpp40Q8R1F9 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Rpp40Q8R1F9 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms