Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Ebf4Q8K4J2 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf4Q8K4J2 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Ebf4Q8K4J2 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf4Q8K4J2 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf4Q8K4J2 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf4Q8K4J2 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf4Q8K4J2 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf4Q8K4J2 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf4Q8K4J2 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf4Q8K4J2 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf4Q8K4J2 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf4Q8K4J2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf4Q8K4J2 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf4Q8K4J2 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf4Q8K4J2 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf4Q8K4J2 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ebf4Q8K4J2 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Ebf4Q8K4J2 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf4Q8K4J2 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
Ebf4Q8K4J2 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf4Q8K4J2 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf4Q8K4J2 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Ebf4Q8K4J2 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Ebf4Q8K4J2 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf4Q8K4J2 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC13.43□□□□□ -0.26
Ebf4Q8K4J2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf4Q8K4J2 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Ebf4Q8K4J2 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13.43□□□□□ -0.26
Ebf4Q8K4J2 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.43□□□□□ -0.26
Ebf4Q8K4J2 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Ebf4Q8K4J2 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Ebf4Q8K4J2 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf4Q8K4J2 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Ebf4Q8K4J2 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Ebf4Q8K4J2 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf4Q8K4J2 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf4Q8K4J2 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Ebf4Q8K4J2 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf4Q8K4J2 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf4Q8K4J2 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.43□□□□□ -0.26
Ebf4Q8K4J2 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf4Q8K4J2 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf4Q8K4J2 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf4Q8K4J2 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf4Q8K4J2 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf4Q8K4J2 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf4Q8K4J2 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf4Q8K4J2 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf4Q8K4J2 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.43□□□□□ -0.26
Ebf4Q8K4J2 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf4Q8K4J2 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf4Q8K4J2 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Ebf4Q8K4J2 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Ebf4Q8K4J2 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Gm43767-201ENSMUST00000198933 381 ntBASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.42□□□□□ -0.26
Ebf4Q8K4J2 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms