Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clrn1Q8K445 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clrn1Q8K445 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clrn1Q8K445 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clrn1Q8K445 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Clrn1Q8K445 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clrn1Q8K445 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clrn1Q8K445 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clrn1Q8K445 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clrn1Q8K445 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Clrn1Q8K445 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clrn1Q8K445 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clrn1Q8K445 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Clrn1Q8K445 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Clrn1Q8K445 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Clrn1Q8K445 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Clrn1Q8K445 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clrn1Q8K445 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Clrn1Q8K445 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clrn1Q8K445 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clrn1Q8K445 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Clrn1Q8K445 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Clrn1Q8K445 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Clrn1Q8K445 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Clrn1Q8K445 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Clrn1Q8K445 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clrn1Q8K445 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Clrn1Q8K445 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Clrn1Q8K445 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.89□□□□□ -0.19
Clrn1Q8K445 Gm14494-201ENSMUST00000118786 435 ntBASIC13.89□□□□□ -0.19
Clrn1Q8K445 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Clrn1Q8K445 Gm17271-201ENSMUST00000165535 355 ntBASIC13.89□□□□□ -0.19
Clrn1Q8K445 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.89□□□□□ -0.19
Clrn1Q8K445 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.89□□□□□ -0.19
Clrn1Q8K445 Gm5264-201ENSMUST00000190584 848 ntBASIC13.89□□□□□ -0.19
Clrn1Q8K445 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.89□□□□□ -0.19
Clrn1Q8K445 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.89□□□□□ -0.19
Clrn1Q8K445 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.89□□□□□ -0.19
Clrn1Q8K445 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clrn1Q8K445 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clrn1Q8K445 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clrn1Q8K445 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clrn1Q8K445 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clrn1Q8K445 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clrn1Q8K445 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clrn1Q8K445 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Clrn1Q8K445 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Clrn1Q8K445 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clrn1Q8K445 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clrn1Q8K445 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Clrn1Q8K445 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn1Q8K445 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn1Q8K445 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Clrn1Q8K445 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Clrn1Q8K445 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn1Q8K445 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn1Q8K445 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn1Q8K445 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Clrn1Q8K445 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn1Q8K445 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn1Q8K445 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.88□□□□□ -0.19
Clrn1Q8K445 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.88□□□□□ -0.19
Clrn1Q8K445 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn1Q8K445 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn1Q8K445 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.88□□□□□ -0.19
Clrn1Q8K445 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn1Q8K445 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn1Q8K445 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn1Q8K445 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn1Q8K445 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.88□□□□□ -0.19
Clrn1Q8K445 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn1Q8K445 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Clrn1Q8K445 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn1Q8K445 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn1Q8K445 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn1Q8K445 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn1Q8K445 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn1Q8K445 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Clrn1Q8K445 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn1Q8K445 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Clrn1Q8K445 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn1Q8K445 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Clrn1Q8K445 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn1Q8K445 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Clrn1Q8K445 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn1Q8K445 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn1Q8K445 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.87□□□□□ -0.19
Clrn1Q8K445 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn1Q8K445 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn1Q8K445 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Clrn1Q8K445 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn1Q8K445 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn1Q8K445 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn1Q8K445 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn1Q8K445 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.87□□□□□ -0.19
Clrn1Q8K445 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn1Q8K445 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn1Q8K445 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Clrn1Q8K445 Gm9385-201ENSMUST00000117563 472 ntBASIC13.87□□□□□ -0.19
Clrn1Q8K445 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 103.5 ms