Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rtp1Q8C8C1 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rtp1Q8C8C1 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rtp1Q8C8C1 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Rtp1Q8C8C1 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rtp1Q8C8C1 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rtp1Q8C8C1 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rtp1Q8C8C1 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.71■□□□□ 0.27
Rtp1Q8C8C1 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Rtp1Q8C8C1 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rtp1Q8C8C1 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rtp1Q8C8C1 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rtp1Q8C8C1 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Rtp1Q8C8C1 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Rtp1Q8C8C1 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rtp1Q8C8C1 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Rtp1Q8C8C1 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Rtp1Q8C8C1 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rtp1Q8C8C1 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rtp1Q8C8C1 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC16.7■□□□□ 0.26
Rtp1Q8C8C1 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rtp1Q8C8C1 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rtp1Q8C8C1 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC16.7■□□□□ 0.26
Rtp1Q8C8C1 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.7■□□□□ 0.26
Rtp1Q8C8C1 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rtp1Q8C8C1 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rtp1Q8C8C1 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.7■□□□□ 0.26
Rtp1Q8C8C1 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Rtp1Q8C8C1 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.7■□□□□ 0.26
Rtp1Q8C8C1 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rtp1Q8C8C1 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Rtp1Q8C8C1 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rtp1Q8C8C1 Tfap2a-203ENSMUST00000223869 2037 ntBASIC16.7■□□□□ 0.26
Rtp1Q8C8C1 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rtp1Q8C8C1 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rtp1Q8C8C1 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rtp1Q8C8C1 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Rtp1Q8C8C1 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Rtp1Q8C8C1 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rtp1Q8C8C1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rtp1Q8C8C1 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rtp1Q8C8C1 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rtp1Q8C8C1 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rtp1Q8C8C1 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rtp1Q8C8C1 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rtp1Q8C8C1 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rtp1Q8C8C1 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rtp1Q8C8C1 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rtp1Q8C8C1 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Rtp1Q8C8C1 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC16.69■□□□□ 0.26
Rtp1Q8C8C1 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Rtp1Q8C8C1 AC150560.1-201ENSMUST00000227731 1187 ntBASIC16.69■□□□□ 0.26
Rtp1Q8C8C1 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Rtp1Q8C8C1 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.69■□□□□ 0.26
Rtp1Q8C8C1 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Rtp1Q8C8C1 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rtp1Q8C8C1 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.69■□□□□ 0.26
Rtp1Q8C8C1 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rtp1Q8C8C1 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.69■□□□□ 0.26
Rtp1Q8C8C1 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rtp1Q8C8C1 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.69■□□□□ 0.26
Rtp1Q8C8C1 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rtp1Q8C8C1 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rtp1Q8C8C1 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rtp1Q8C8C1 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rtp1Q8C8C1 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rtp1Q8C8C1 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rtp1Q8C8C1 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rtp1Q8C8C1 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rtp1Q8C8C1 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rtp1Q8C8C1 Gm13392-201ENSMUST00000117708 150 ntBASIC16.68■□□□□ 0.26
Rtp1Q8C8C1 Gm12390-201ENSMUST00000117897 397 ntBASIC16.68■□□□□ 0.26
Rtp1Q8C8C1 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rtp1Q8C8C1 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Rtp1Q8C8C1 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.68■□□□□ 0.26
Rtp1Q8C8C1 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rtp1Q8C8C1 AC154846.1-201ENSMUST00000226278 862 ntBASIC16.68■□□□□ 0.26
Rtp1Q8C8C1 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.68■□□□□ 0.26
Rtp1Q8C8C1 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Rtp1Q8C8C1 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rtp1Q8C8C1 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rtp1Q8C8C1 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rtp1Q8C8C1 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rtp1Q8C8C1 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rtp1Q8C8C1 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.68■□□□□ 0.26
Rtp1Q8C8C1 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rtp1Q8C8C1 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rtp1Q8C8C1 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Rtp1Q8C8C1 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rtp1Q8C8C1 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.67■□□□□ 0.26
Rtp1Q8C8C1 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtp1Q8C8C1 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.67■□□□□ 0.26
Rtp1Q8C8C1 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtp1Q8C8C1 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rtp1Q8C8C1 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Rtp1Q8C8C1 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Rtp1Q8C8C1 Mir1247-201ENSMUST00000116706 82 ntBASIC16.67■□□□□ 0.26
Rtp1Q8C8C1 Gm8835-201ENSMUST00000173096 1169 ntBASIC16.67■□□□□ 0.26
Rtp1Q8C8C1 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Rtp1Q8C8C1 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms