Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.52■□□□□ 0.08
Uba3Q8C878 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Uba3Q8C878 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.52■□□□□ 0.08
Uba3Q8C878 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.52■□□□□ 0.08
Uba3Q8C878 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.52■□□□□ 0.08
Uba3Q8C878 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Uba3Q8C878 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Uba3Q8C878 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Uba3Q8C878 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC15.52■□□□□ 0.08
Uba3Q8C878 Gm11745-201ENSMUST00000121669 448 ntBASIC15.52■□□□□ 0.08
Uba3Q8C878 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Uba3Q8C878 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.52■□□□□ 0.08
Uba3Q8C878 Gm45612-201ENSMUST00000211320 160 ntBASIC15.52■□□□□ 0.08
Uba3Q8C878 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.52■□□□□ 0.08
Uba3Q8C878 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.52■□□□□ 0.08
Uba3Q8C878 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Uba3Q8C878 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Uba3Q8C878 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Uba3Q8C878 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Uba3Q8C878 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Uba3Q8C878 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Uba3Q8C878 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Uba3Q8C878 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Uba3Q8C878 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Uba3Q8C878 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Uba3Q8C878 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.52■□□□□ 0.07
Uba3Q8C878 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Uba3Q8C878 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Uba3Q8C878 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Uba3Q8C878 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Uba3Q8C878 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Uba3Q8C878 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Uba3Q8C878 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Uba3Q8C878 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Uba3Q8C878 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Uba3Q8C878 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Uba3Q8C878 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Uba3Q8C878 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Uba3Q8C878 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Uba3Q8C878 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Uba3Q8C878 Gm13464-201ENSMUST00000119418 935 ntBASIC15.51■□□□□ 0.07
Uba3Q8C878 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.51■□□□□ 0.07
Uba3Q8C878 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Uba3Q8C878 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.51■□□□□ 0.07
Uba3Q8C878 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.51■□□□□ 0.07
Uba3Q8C878 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Uba3Q8C878 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Uba3Q8C878 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Uba3Q8C878 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Uba3Q8C878 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Uba3Q8C878 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Uba3Q8C878 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Uba3Q8C878 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Uba3Q8C878 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Uba3Q8C878 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Uba3Q8C878 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Uba3Q8C878 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
Uba3Q8C878 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Uba3Q8C878 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Uba3Q8C878 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Uba3Q8C878 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Uba3Q8C878 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Uba3Q8C878 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Uba3Q8C878 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Uba3Q8C878 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Uba3Q8C878 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Uba3Q8C878 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Uba3Q8C878 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Uba3Q8C878 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Uba3Q8C878 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Uba3Q8C878 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Uba3Q8C878 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Uba3Q8C878 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Uba3Q8C878 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Uba3Q8C878 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Uba3Q8C878 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Uba3Q8C878 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Uba3Q8C878 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Uba3Q8C878 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Uba3Q8C878 Gm6973-201ENSMUST00000117080 721 ntBASIC15.5■□□□□ 0.07
Uba3Q8C878 Gm13365-201ENSMUST00000121188 973 ntBASIC15.5■□□□□ 0.07
Uba3Q8C878 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Uba3Q8C878 Gm27494-201ENSMUST00000184735 189 ntBASIC15.5■□□□□ 0.07
Uba3Q8C878 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.5■□□□□ 0.07
Uba3Q8C878 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Uba3Q8C878 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Uba3Q8C878 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Uba3Q8C878 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Uba3Q8C878 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Uba3Q8C878 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.5■□□□□ 0.07
Uba3Q8C878 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Uba3Q8C878 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
Uba3Q8C878 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Uba3Q8C878 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Uba3Q8C878 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Uba3Q8C878 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Uba3Q8C878 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Uba3Q8C878 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Uba3Q8C878 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.49■□□□□ 0.07
Uba3Q8C878 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms