Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Ccdc60Q8C4J0 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc60Q8C4J0 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Ccdc60Q8C4J0 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc60Q8C4J0 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc60Q8C4J0 Mir1895-201ENSMUST00000122615 79 ntBASIC18.78■□□□□ 0.6
Ccdc60Q8C4J0 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
Ccdc60Q8C4J0 Gm27920-201ENSMUST00000183953 96 ntBASIC18.78■□□□□ 0.6
Ccdc60Q8C4J0 Gm2756-201ENSMUST00000195851 400 ntBASIC18.78■□□□□ 0.6
Ccdc60Q8C4J0 AC166341.4-201ENSMUST00000220625 123 ntBASIC18.78■□□□□ 0.6
Ccdc60Q8C4J0 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Ccdc60Q8C4J0 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc60Q8C4J0 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc60Q8C4J0 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc60Q8C4J0 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ccdc60Q8C4J0 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc60Q8C4J0 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc60Q8C4J0 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc60Q8C4J0 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc60Q8C4J0 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc60Q8C4J0 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc60Q8C4J0 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc60Q8C4J0 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC18.78■□□□□ 0.6
Ccdc60Q8C4J0 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc60Q8C4J0 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Ccdc60Q8C4J0 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc60Q8C4J0 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc60Q8C4J0 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC18.77■□□□□ 0.6
Ccdc60Q8C4J0 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc60Q8C4J0 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC18.77■□□□□ 0.6
Ccdc60Q8C4J0 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC18.77■□□□□ 0.6
Ccdc60Q8C4J0 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Ccdc60Q8C4J0 Gm18057-201ENSMUST00000208220 503 ntBASIC18.77■□□□□ 0.6
Ccdc60Q8C4J0 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc60Q8C4J0 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc60Q8C4J0 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc60Q8C4J0 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ccdc60Q8C4J0 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Ccdc60Q8C4J0 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ccdc60Q8C4J0 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ccdc60Q8C4J0 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc60Q8C4J0 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc60Q8C4J0 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc60Q8C4J0 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc60Q8C4J0 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ccdc60Q8C4J0 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ccdc60Q8C4J0 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc60Q8C4J0 Gm12017-201ENSMUST00000122453 1003 ntBASIC18.76■□□□□ 0.59
Ccdc60Q8C4J0 Rprl2-201ENSMUST00000157150 290 ntBASIC18.76■□□□□ 0.59
Ccdc60Q8C4J0 Gm43575-201ENSMUST00000196420 516 ntBASIC18.76■□□□□ 0.59
Ccdc60Q8C4J0 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc60Q8C4J0 Gm45133-201ENSMUST00000207548 2773 ntBASIC18.76■□□□□ 0.59
Ccdc60Q8C4J0 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc60Q8C4J0 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc60Q8C4J0 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc60Q8C4J0 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Ccdc60Q8C4J0 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ccdc60Q8C4J0 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc60Q8C4J0 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc60Q8C4J0 Gm37736-201ENSMUST00000193564 2802 ntBASIC18.76■□□□□ 0.59
Ccdc60Q8C4J0 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc60Q8C4J0 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc60Q8C4J0 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc60Q8C4J0 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ccdc60Q8C4J0 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC18.75■□□□□ 0.59
Ccdc60Q8C4J0 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Ccdc60Q8C4J0 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Ccdc60Q8C4J0 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc60Q8C4J0 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc60Q8C4J0 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc60Q8C4J0 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC18.75■□□□□ 0.59
Ccdc60Q8C4J0 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc60Q8C4J0 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Ccdc60Q8C4J0 Gm6736-201ENSMUST00000166583 948 ntBASIC18.75■□□□□ 0.59
Ccdc60Q8C4J0 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ccdc60Q8C4J0 AC151286.1-201ENSMUST00000198489 145 ntBASIC18.75■□□□□ 0.59
Ccdc60Q8C4J0 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC18.75■□□□□ 0.59
Ccdc60Q8C4J0 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC18.75■□□□□ 0.59
Ccdc60Q8C4J0 Chchd1-203ENSMUST00000224633 557 ntBASIC18.75■□□□□ 0.59
Ccdc60Q8C4J0 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc60Q8C4J0 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ccdc60Q8C4J0 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc60Q8C4J0 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc60Q8C4J0 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc60Q8C4J0 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc60Q8C4J0 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC18.74■□□□□ 0.59
Ccdc60Q8C4J0 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc60Q8C4J0 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc60Q8C4J0 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc60Q8C4J0 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Ccdc60Q8C4J0 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc60Q8C4J0 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc60Q8C4J0 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc60Q8C4J0 Gm23935-201ENSMUST00000102303 57 ntBASIC18.74■□□□□ 0.59
Ccdc60Q8C4J0 Gm24270-201ENSMUST00000102326 57 ntBASIC18.74■□□□□ 0.59
Ccdc60Q8C4J0 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc60Q8C4J0 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC18.74■□□□□ 0.59
Ccdc60Q8C4J0 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc60Q8C4J0 Gm24245-201ENSMUST00000157318 57 ntBASIC18.74■□□□□ 0.59
Ccdc60Q8C4J0 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms