Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim6Q8BGE7 Gm12008-201ENSMUST00000117791 755 ntBASIC15.67■□□□□ 0.1
Trim6Q8BGE7 Gm12895-201ENSMUST00000122214 226 ntBASIC15.67■□□□□ 0.1
Trim6Q8BGE7 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim6Q8BGE7 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim6Q8BGE7 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim6Q8BGE7 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim6Q8BGE7 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim6Q8BGE7 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim6Q8BGE7 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim6Q8BGE7 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trim6Q8BGE7 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim6Q8BGE7 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trim6Q8BGE7 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim6Q8BGE7 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trim6Q8BGE7 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trim6Q8BGE7 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim6Q8BGE7 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim6Q8BGE7 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim6Q8BGE7 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim6Q8BGE7 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim6Q8BGE7 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim6Q8BGE7 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.67■□□□□ 0.1
Trim6Q8BGE7 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim6Q8BGE7 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim6Q8BGE7 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.67■□□□□ 0.1
Trim6Q8BGE7 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim6Q8BGE7 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim6Q8BGE7 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim6Q8BGE7 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim6Q8BGE7 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim6Q8BGE7 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trim6Q8BGE7 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim6Q8BGE7 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim6Q8BGE7 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim6Q8BGE7 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim6Q8BGE7 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim6Q8BGE7 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim6Q8BGE7 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim6Q8BGE7 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim6Q8BGE7 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim6Q8BGE7 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim6Q8BGE7 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim6Q8BGE7 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim6Q8BGE7 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim6Q8BGE7 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim6Q8BGE7 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim6Q8BGE7 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim6Q8BGE7 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC15.66■□□□□ 0.1
Trim6Q8BGE7 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.66■□□□□ 0.1
Trim6Q8BGE7 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.66■□□□□ 0.1
Trim6Q8BGE7 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim6Q8BGE7 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim6Q8BGE7 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim6Q8BGE7 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim6Q8BGE7 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim6Q8BGE7 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim6Q8BGE7 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim6Q8BGE7 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Trim6Q8BGE7 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim6Q8BGE7 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Trim6Q8BGE7 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim6Q8BGE7 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim6Q8BGE7 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim6Q8BGE7 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim6Q8BGE7 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim6Q8BGE7 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim6Q8BGE7 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trim6Q8BGE7 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trim6Q8BGE7 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim6Q8BGE7 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Trim6Q8BGE7 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim6Q8BGE7 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Trim6Q8BGE7 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim6Q8BGE7 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim6Q8BGE7 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim6Q8BGE7 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim6Q8BGE7 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trim6Q8BGE7 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.65■□□□□ 0.1
Trim6Q8BGE7 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Trim6Q8BGE7 Gm12644-201ENSMUST00000119935 606 ntBASIC15.65■□□□□ 0.1
Trim6Q8BGE7 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim6Q8BGE7 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.65■□□□□ 0.1
Trim6Q8BGE7 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.65■□□□□ 0.1
Trim6Q8BGE7 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim6Q8BGE7 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim6Q8BGE7 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trim6Q8BGE7 Gm33142-201ENSMUST00000193913 867 ntBASIC15.65■□□□□ 0.1
Trim6Q8BGE7 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Trim6Q8BGE7 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Trim6Q8BGE7 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim6Q8BGE7 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim6Q8BGE7 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim6Q8BGE7 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim6Q8BGE7 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim6Q8BGE7 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Trim6Q8BGE7 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.65■□□□□ 0.1
Trim6Q8BGE7 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim6Q8BGE7 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim6Q8BGE7 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms