Protein–RNA interactions for Protein: Q80YS6

Afap1, Actin filament-associated protein 1, mousemouse

Predictions only

Length 731 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Afap1Q80YS6 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Afap1Q80YS6 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Afap1Q80YS6 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Afap1Q80YS6 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Afap1Q80YS6 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Afap1Q80YS6 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Afap1Q80YS6 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Afap1Q80YS6 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Afap1Q80YS6 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Afap1Q80YS6 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Afap1Q80YS6 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Afap1Q80YS6 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC20.69■□□□□ 0.9
Afap1Q80YS6 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Afap1Q80YS6 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Afap1Q80YS6 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Afap1Q80YS6 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC20.69■□□□□ 0.9
Afap1Q80YS6 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC20.69■□□□□ 0.9
Afap1Q80YS6 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Afap1Q80YS6 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC20.69■□□□□ 0.9
Afap1Q80YS6 Mir3547-201ENSMUST00000175461 88 ntBASIC20.69■□□□□ 0.9
Afap1Q80YS6 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC20.69■□□□□ 0.9
Afap1Q80YS6 Gm27243-201ENSMUST00000183964 521 ntBASIC20.69■□□□□ 0.9
Afap1Q80YS6 Gm5370-201ENSMUST00000187187 574 ntBASIC20.69■□□□□ 0.9
Afap1Q80YS6 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC20.69■□□□□ 0.9
Afap1Q80YS6 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Afap1Q80YS6 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Afap1Q80YS6 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Afap1Q80YS6 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Afap1Q80YS6 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Afap1Q80YS6 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Afap1Q80YS6 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Afap1Q80YS6 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Afap1Q80YS6 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Afap1Q80YS6 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Afap1Q80YS6 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Afap1Q80YS6 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Afap1Q80YS6 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Afap1Q80YS6 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Afap1Q80YS6 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Afap1Q80YS6 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Afap1Q80YS6 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC20.68■□□□□ 0.9
Afap1Q80YS6 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC20.68■□□□□ 0.9
Afap1Q80YS6 AC159747.1-201ENSMUST00000219903 265 ntBASIC20.68■□□□□ 0.9
Afap1Q80YS6 AC154276.1-201ENSMUST00000228874 1299 ntBASIC20.68■□□□□ 0.9
Afap1Q80YS6 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Afap1Q80YS6 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Afap1Q80YS6 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Afap1Q80YS6 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Afap1Q80YS6 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Afap1Q80YS6 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Afap1Q80YS6 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Afap1Q80YS6 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Afap1Q80YS6 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Afap1Q80YS6 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Afap1Q80YS6 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Afap1Q80YS6 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Afap1Q80YS6 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Afap1Q80YS6 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Afap1Q80YS6 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Afap1Q80YS6 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC20.67■□□□□ 0.9
Afap1Q80YS6 Gm12384-201ENSMUST00000119228 919 ntBASIC20.67■□□□□ 0.9
Afap1Q80YS6 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC20.67■□□□□ 0.9
Afap1Q80YS6 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC20.67■□□□□ 0.9
Afap1Q80YS6 Gm43094-201ENSMUST00000196549 921 ntBASIC20.67■□□□□ 0.9
Afap1Q80YS6 Gm40466-201ENSMUST00000212174 422 ntBASIC20.67■□□□□ 0.9
Afap1Q80YS6 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Afap1Q80YS6 AC192088.1-201ENSMUST00000227561 301 ntBASIC20.67■□□□□ 0.9
Afap1Q80YS6 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC20.67■□□□□ 0.9
Afap1Q80YS6 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.67■□□□□ 0.9
Afap1Q80YS6 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Afap1Q80YS6 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Afap1Q80YS6 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC20.67■□□□□ 0.9
Afap1Q80YS6 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Afap1Q80YS6 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Afap1Q80YS6 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Afap1Q80YS6 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Afap1Q80YS6 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Afap1Q80YS6 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Afap1Q80YS6 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Afap1Q80YS6 Gm15236-201ENSMUST00000117309 379 ntBASIC20.66■□□□□ 0.9
Afap1Q80YS6 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Afap1Q80YS6 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC20.66■□□□□ 0.9
Afap1Q80YS6 Mir8109-201ENSMUST00000184375 117 ntBASIC20.66■□□□□ 0.9
Afap1Q80YS6 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC20.66■□□□□ 0.9
Afap1Q80YS6 Gm19078-201ENSMUST00000206311 727 ntBASIC20.66■□□□□ 0.9
Afap1Q80YS6 Gm18056-201ENSMUST00000207670 568 ntBASIC20.66■□□□□ 0.9
Afap1Q80YS6 Gm18061-201ENSMUST00000208350 562 ntBASIC20.66■□□□□ 0.9
Afap1Q80YS6 Gm18063-201ENSMUST00000208529 568 ntBASIC20.66■□□□□ 0.9
Afap1Q80YS6 Gm18052-201ENSMUST00000208750 559 ntBASIC20.66■□□□□ 0.9
Afap1Q80YS6 Gm7619-201ENSMUST00000210649 1282 ntBASIC20.66■□□□□ 0.9
Afap1Q80YS6 Gm6013-201ENSMUST00000212264 699 ntBASIC20.66■□□□□ 0.9
Afap1Q80YS6 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Afap1Q80YS6 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Afap1Q80YS6 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Afap1Q80YS6 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Afap1Q80YS6 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC20.66■□□□□ 0.9
Afap1Q80YS6 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Afap1Q80YS6 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Afap1Q80YS6 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Afap1Q80YS6 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms