Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ush1gQ80T11 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ush1gQ80T11 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ush1gQ80T11 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Ush1gQ80T11 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.1■□□□□ 0.17
Ush1gQ80T11 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.1■□□□□ 0.17
Ush1gQ80T11 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ush1gQ80T11 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ush1gQ80T11 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ush1gQ80T11 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.1■□□□□ 0.17
Ush1gQ80T11 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ush1gQ80T11 Gm14767-201ENSMUST00000121559 586 ntBASIC16.1■□□□□ 0.17
Ush1gQ80T11 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ush1gQ80T11 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC16.1■□□□□ 0.17
Ush1gQ80T11 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Ush1gQ80T11 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.1■□□□□ 0.17
Ush1gQ80T11 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC16.1■□□□□ 0.17
Ush1gQ80T11 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ush1gQ80T11 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ush1gQ80T11 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ush1gQ80T11 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ush1gQ80T11 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ush1gQ80T11 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Ush1gQ80T11 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Ush1gQ80T11 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Ush1gQ80T11 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ush1gQ80T11 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ush1gQ80T11 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ush1gQ80T11 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ush1gQ80T11 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ush1gQ80T11 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.09■□□□□ 0.17
Ush1gQ80T11 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ush1gQ80T11 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ush1gQ80T11 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ush1gQ80T11 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.09■□□□□ 0.17
Ush1gQ80T11 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ush1gQ80T11 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ush1gQ80T11 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.09■□□□□ 0.17
Ush1gQ80T11 Gm8116-201ENSMUST00000182917 1201 ntBASIC16.09■□□□□ 0.17
Ush1gQ80T11 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ush1gQ80T11 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ush1gQ80T11 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ush1gQ80T11 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ush1gQ80T11 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ush1gQ80T11 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ush1gQ80T11 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.09■□□□□ 0.17
Ush1gQ80T11 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ush1gQ80T11 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ush1gQ80T11 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC16.09■□□□□ 0.17
Ush1gQ80T11 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ush1gQ80T11 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ush1gQ80T11 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ush1gQ80T11 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.09■□□□□ 0.17
Ush1gQ80T11 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ush1gQ80T11 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ush1gQ80T11 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ush1gQ80T11 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ush1gQ80T11 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Ush1gQ80T11 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ush1gQ80T11 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Ush1gQ80T11 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Ush1gQ80T11 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ush1gQ80T11 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ush1gQ80T11 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Ush1gQ80T11 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.08■□□□□ 0.16
Ush1gQ80T11 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Ush1gQ80T11 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
Ush1gQ80T11 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.08■□□□□ 0.16
Ush1gQ80T11 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC16.08■□□□□ 0.16
Ush1gQ80T11 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ush1gQ80T11 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.08■□□□□ 0.16
Ush1gQ80T11 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Ush1gQ80T11 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Ush1gQ80T11 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ush1gQ80T11 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.08■□□□□ 0.16
Ush1gQ80T11 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.08■□□□□ 0.16
Ush1gQ80T11 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ush1gQ80T11 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ush1gQ80T11 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ush1gQ80T11 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ush1gQ80T11 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ush1gQ80T11 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ush1gQ80T11 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ush1gQ80T11 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ush1gQ80T11 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ush1gQ80T11 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ush1gQ80T11 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ush1gQ80T11 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Ush1gQ80T11 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Ush1gQ80T11 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Ush1gQ80T11 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ush1gQ80T11 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ush1gQ80T11 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ush1gQ80T11 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.07■□□□□ 0.16
Ush1gQ80T11 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ush1gQ80T11 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.07■□□□□ 0.16
Ush1gQ80T11 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC16.07■□□□□ 0.16
Ush1gQ80T11 Gm38294-201ENSMUST00000192831 381 ntBASIC16.07■□□□□ 0.16
Ush1gQ80T11 Gtpbp10-211ENSMUST00000198799 648 ntBASIC16.07■□□□□ 0.16
Ush1gQ80T11 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms