Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.43■□□□□ 0.06
Prpf38bQ80SY5 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf38bQ80SY5 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC15.43■□□□□ 0.06
Prpf38bQ80SY5 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.43■□□□□ 0.06
Prpf38bQ80SY5 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf38bQ80SY5 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf38bQ80SY5 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf38bQ80SY5 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf38bQ80SY5 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Prpf38bQ80SY5 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf38bQ80SY5 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Prpf38bQ80SY5 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf38bQ80SY5 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf38bQ80SY5 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
Prpf38bQ80SY5 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf38bQ80SY5 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf38bQ80SY5 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.43■□□□□ 0.06
Prpf38bQ80SY5 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf38bQ80SY5 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf38bQ80SY5 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf38bQ80SY5 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf38bQ80SY5 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf38bQ80SY5 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf38bQ80SY5 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf38bQ80SY5 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf38bQ80SY5 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf38bQ80SY5 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf38bQ80SY5 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf38bQ80SY5 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf38bQ80SY5 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf38bQ80SY5 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.42■□□□□ 0.06
Prpf38bQ80SY5 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf38bQ80SY5 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf38bQ80SY5 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Prpf38bQ80SY5 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC15.42■□□□□ 0.06
Prpf38bQ80SY5 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.42■□□□□ 0.06
Prpf38bQ80SY5 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.42■□□□□ 0.06
Prpf38bQ80SY5 AC149294.4-201ENSMUST00000227870 882 ntBASIC15.42■□□□□ 0.06
Prpf38bQ80SY5 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf38bQ80SY5 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf38bQ80SY5 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf38bQ80SY5 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf38bQ80SY5 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf38bQ80SY5 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf38bQ80SY5 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf38bQ80SY5 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf38bQ80SY5 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf38bQ80SY5 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf38bQ80SY5 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf38bQ80SY5 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.42■□□□□ 0.06
Prpf38bQ80SY5 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Prpf38bQ80SY5 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.42■□□□□ 0.06
Prpf38bQ80SY5 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf38bQ80SY5 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Prpf38bQ80SY5 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf38bQ80SY5 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf38bQ80SY5 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Prpf38bQ80SY5 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf38bQ80SY5 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf38bQ80SY5 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf38bQ80SY5 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Prpf38bQ80SY5 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Prpf38bQ80SY5 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf38bQ80SY5 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Prpf38bQ80SY5 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Prpf38bQ80SY5 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf38bQ80SY5 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf38bQ80SY5 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf38bQ80SY5 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.41■□□□□ 0.06
Prpf38bQ80SY5 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf38bQ80SY5 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Prpf38bQ80SY5 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf38bQ80SY5 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
Prpf38bQ80SY5 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf38bQ80SY5 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf38bQ80SY5 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf38bQ80SY5 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.41■□□□□ 0.06
Prpf38bQ80SY5 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.41■□□□□ 0.06
Prpf38bQ80SY5 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.41■□□□□ 0.06
Prpf38bQ80SY5 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf38bQ80SY5 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf38bQ80SY5 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf38bQ80SY5 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf38bQ80SY5 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf38bQ80SY5 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf38bQ80SY5 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf38bQ80SY5 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf38bQ80SY5 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Prpf38bQ80SY5 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Prpf38bQ80SY5 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Prpf38bQ80SY5 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Prpf38bQ80SY5 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf38bQ80SY5 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf38bQ80SY5 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf38bQ80SY5 Gm17837-201ENSMUST00000186435 985 ntBASIC15.4■□□□□ 0.06
Prpf38bQ80SY5 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.4■□□□□ 0.06
Prpf38bQ80SY5 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf38bQ80SY5 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf38bQ80SY5 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Prpf38bQ80SY5 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms