Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh8Q7TSK3 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh8Q7TSK3 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdh8Q7TSK3 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh8Q7TSK3 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh8Q7TSK3 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh8Q7TSK3 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh8Q7TSK3 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh8Q7TSK3 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdh8Q7TSK3 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Pcdh8Q7TSK3 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdh8Q7TSK3 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh8Q7TSK3 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh8Q7TSK3 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh8Q7TSK3 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh8Q7TSK3 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.53□□□□□ -0.08
Pcdh8Q7TSK3 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh8Q7TSK3 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh8Q7TSK3 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh8Q7TSK3 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.53□□□□□ -0.08
Pcdh8Q7TSK3 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.53□□□□□ -0.08
Pcdh8Q7TSK3 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh8Q7TSK3 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh8Q7TSK3 Gm5779-201ENSMUST00000218467 910 ntBASIC14.53□□□□□ -0.08
Pcdh8Q7TSK3 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh8Q7TSK3 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh8Q7TSK3 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh8Q7TSK3 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh8Q7TSK3 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh8Q7TSK3 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh8Q7TSK3 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.53□□□□□ -0.08
Pcdh8Q7TSK3 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh8Q7TSK3 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh8Q7TSK3 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh8Q7TSK3 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh8Q7TSK3 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh8Q7TSK3 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Pcdh8Q7TSK3 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Pcdh8Q7TSK3 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Pcdh8Q7TSK3 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh8Q7TSK3 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Pcdh8Q7TSK3 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdh8Q7TSK3 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Pcdh8Q7TSK3 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
Pcdh8Q7TSK3 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh8Q7TSK3 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh8Q7TSK3 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh8Q7TSK3 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh8Q7TSK3 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh8Q7TSK3 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Pcdh8Q7TSK3 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh8Q7TSK3 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Pcdh8Q7TSK3 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Pcdh8Q7TSK3 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh8Q7TSK3 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.52□□□□□ -0.09
Pcdh8Q7TSK3 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.52□□□□□ -0.09
Pcdh8Q7TSK3 Gm15483-201ENSMUST00000120338 456 ntBASIC14.52□□□□□ -0.09
Pcdh8Q7TSK3 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh8Q7TSK3 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh8Q7TSK3 Gm20949-201ENSMUST00000206478 952 ntBASIC14.52□□□□□ -0.09
Pcdh8Q7TSK3 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh8Q7TSK3 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.52□□□□□ -0.09
Pcdh8Q7TSK3 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.52□□□□□ -0.09
Pcdh8Q7TSK3 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh8Q7TSK3 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh8Q7TSK3 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh8Q7TSK3 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Pcdh8Q7TSK3 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh8Q7TSK3 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh8Q7TSK3 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
Pcdh8Q7TSK3 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh8Q7TSK3 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Pcdh8Q7TSK3 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh8Q7TSK3 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh8Q7TSK3 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh8Q7TSK3 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh8Q7TSK3 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh8Q7TSK3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh8Q7TSK3 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh8Q7TSK3 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Pcdh8Q7TSK3 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.51□□□□□ -0.09
Pcdh8Q7TSK3 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.51□□□□□ -0.09
Pcdh8Q7TSK3 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh8Q7TSK3 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh8Q7TSK3 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Pcdh8Q7TSK3 Gm2810-201ENSMUST00000118681 990 ntBASIC14.51□□□□□ -0.09
Pcdh8Q7TSK3 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh8Q7TSK3 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh8Q7TSK3 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Pcdh8Q7TSK3 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Pcdh8Q7TSK3 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh8Q7TSK3 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.51□□□□□ -0.09
Pcdh8Q7TSK3 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh8Q7TSK3 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh8Q7TSK3 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Pcdh8Q7TSK3 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh8Q7TSK3 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh8Q7TSK3 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh8Q7TSK3 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.51□□□□□ -0.09
Pcdh8Q7TSK3 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms