Protein–RNA interactions for Protein: Q6W8Q3

Pcp4l1, Purkinje cell protein 4-like protein 1, mousemouse

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcp4l1Q6W8Q3 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcp4l1Q6W8Q3 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.78□□□□□ -0.52
Pcp4l1Q6W8Q3 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcp4l1Q6W8Q3 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcp4l1Q6W8Q3 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcp4l1Q6W8Q3 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcp4l1Q6W8Q3 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcp4l1Q6W8Q3 Gm7143-201ENSMUST00000222811 859 ntBASIC11.78□□□□□ -0.52
Pcp4l1Q6W8Q3 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcp4l1Q6W8Q3 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcp4l1Q6W8Q3 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Pcp4l1Q6W8Q3 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcp4l1Q6W8Q3 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcp4l1Q6W8Q3 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcp4l1Q6W8Q3 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcp4l1Q6W8Q3 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcp4l1Q6W8Q3 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcp4l1Q6W8Q3 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcp4l1Q6W8Q3 Gm43375-201ENSMUST00000196705 2480 ntBASIC11.78□□□□□ -0.52
Pcp4l1Q6W8Q3 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcp4l1Q6W8Q3 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcp4l1Q6W8Q3 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcp4l1Q6W8Q3 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcp4l1Q6W8Q3 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Pcp4l1Q6W8Q3 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcp4l1Q6W8Q3 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Pcp4l1Q6W8Q3 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcp4l1Q6W8Q3 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Pcp4l1Q6W8Q3 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcp4l1Q6W8Q3 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcp4l1Q6W8Q3 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pcp4l1Q6W8Q3 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Pcp4l1Q6W8Q3 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.77□□□□□ -0.52
Pcp4l1Q6W8Q3 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Pcp4l1Q6W8Q3 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcp4l1Q6W8Q3 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcp4l1Q6W8Q3 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Pcp4l1Q6W8Q3 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.77□□□□□ -0.53
Pcp4l1Q6W8Q3 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcp4l1Q6W8Q3 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcp4l1Q6W8Q3 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcp4l1Q6W8Q3 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.77□□□□□ -0.53
Pcp4l1Q6W8Q3 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcp4l1Q6W8Q3 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcp4l1Q6W8Q3 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcp4l1Q6W8Q3 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC11.77□□□□□ -0.53
Pcp4l1Q6W8Q3 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcp4l1Q6W8Q3 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.77□□□□□ -0.53
Pcp4l1Q6W8Q3 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Pcp4l1Q6W8Q3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcp4l1Q6W8Q3 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcp4l1Q6W8Q3 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcp4l1Q6W8Q3 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcp4l1Q6W8Q3 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcp4l1Q6W8Q3 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcp4l1Q6W8Q3 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Pcp4l1Q6W8Q3 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.76□□□□□ -0.53
Pcp4l1Q6W8Q3 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcp4l1Q6W8Q3 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.76□□□□□ -0.53
Pcp4l1Q6W8Q3 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Pcp4l1Q6W8Q3 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcp4l1Q6W8Q3 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcp4l1Q6W8Q3 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcp4l1Q6W8Q3 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcp4l1Q6W8Q3 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcp4l1Q6W8Q3 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcp4l1Q6W8Q3 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.76□□□□□ -0.53
Pcp4l1Q6W8Q3 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcp4l1Q6W8Q3 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcp4l1Q6W8Q3 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcp4l1Q6W8Q3 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcp4l1Q6W8Q3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcp4l1Q6W8Q3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC11.76□□□□□ -0.53
Pcp4l1Q6W8Q3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcp4l1Q6W8Q3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcp4l1Q6W8Q3 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcp4l1Q6W8Q3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC11.76□□□□□ -0.53
Pcp4l1Q6W8Q3 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcp4l1Q6W8Q3 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcp4l1Q6W8Q3 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Pcp4l1Q6W8Q3 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.76□□□□□ -0.53
Pcp4l1Q6W8Q3 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.76□□□□□ -0.53
Pcp4l1Q6W8Q3 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Pcp4l1Q6W8Q3 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Pcp4l1Q6W8Q3 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.76□□□□□ -0.53
Pcp4l1Q6W8Q3 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcp4l1Q6W8Q3 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.76□□□□□ -0.53
Pcp4l1Q6W8Q3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC11.76□□□□□ -0.53
Pcp4l1Q6W8Q3 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcp4l1Q6W8Q3 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcp4l1Q6W8Q3 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC11.76□□□□□ -0.53
Pcp4l1Q6W8Q3 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Pcp4l1Q6W8Q3 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcp4l1Q6W8Q3 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcp4l1Q6W8Q3 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcp4l1Q6W8Q3 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcp4l1Q6W8Q3 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcp4l1Q6W8Q3 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcp4l1Q6W8Q3 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Pcp4l1Q6W8Q3 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms