Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Npc1l1Q6T3U4 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Npc1l1Q6T3U4 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Npc1l1Q6T3U4 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Npc1l1Q6T3U4 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Npc1l1Q6T3U4 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Npc1l1Q6T3U4 Gm13453-201ENSMUST00000118708 357 ntBASIC17.61■□□□□ 0.41
Npc1l1Q6T3U4 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Npc1l1Q6T3U4 Gm45098-201ENSMUST00000207179 657 ntBASIC17.61■□□□□ 0.41
Npc1l1Q6T3U4 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC17.61■□□□□ 0.41
Npc1l1Q6T3U4 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Npc1l1Q6T3U4 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Npc1l1Q6T3U4 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Npc1l1Q6T3U4 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Npc1l1Q6T3U4 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Npc1l1Q6T3U4 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Npc1l1Q6T3U4 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Npc1l1Q6T3U4 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Npc1l1Q6T3U4 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Npc1l1Q6T3U4 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Npc1l1Q6T3U4 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Npc1l1Q6T3U4 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.6■□□□□ 0.41
Npc1l1Q6T3U4 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Npc1l1Q6T3U4 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Npc1l1Q6T3U4 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Npc1l1Q6T3U4 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Npc1l1Q6T3U4 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Npc1l1Q6T3U4 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Npc1l1Q6T3U4 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Npc1l1Q6T3U4 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Npc1l1Q6T3U4 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Npc1l1Q6T3U4 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Npc1l1Q6T3U4 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC17.6■□□□□ 0.41
Npc1l1Q6T3U4 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Npc1l1Q6T3U4 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.6■□□□□ 0.41
Npc1l1Q6T3U4 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Npc1l1Q6T3U4 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC17.6■□□□□ 0.41
Npc1l1Q6T3U4 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Npc1l1Q6T3U4 H2-Pa-201ENSMUST00000182803 626 ntBASIC17.6■□□□□ 0.41
Npc1l1Q6T3U4 Mir8102-201ENSMUST00000184148 139 ntBASIC17.6■□□□□ 0.41
Npc1l1Q6T3U4 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Npc1l1Q6T3U4 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Npc1l1Q6T3U4 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Npc1l1Q6T3U4 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Npc1l1Q6T3U4 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.6■□□□□ 0.41
Npc1l1Q6T3U4 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Npc1l1Q6T3U4 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Npc1l1Q6T3U4 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Npc1l1Q6T3U4 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Npc1l1Q6T3U4 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Npc1l1Q6T3U4 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Npc1l1Q6T3U4 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Npc1l1Q6T3U4 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Npc1l1Q6T3U4 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Npc1l1Q6T3U4 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.59■□□□□ 0.41
Npc1l1Q6T3U4 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Npc1l1Q6T3U4 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Npc1l1Q6T3U4 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Npc1l1Q6T3U4 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Npc1l1Q6T3U4 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.59■□□□□ 0.41
Npc1l1Q6T3U4 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Npc1l1Q6T3U4 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Npc1l1Q6T3U4 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Npc1l1Q6T3U4 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Npc1l1Q6T3U4 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Npc1l1Q6T3U4 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Npc1l1Q6T3U4 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC17.58■□□□□ 0.41
Npc1l1Q6T3U4 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.58■□□□□ 0.41
Npc1l1Q6T3U4 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Npc1l1Q6T3U4 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC17.58■□□□□ 0.41
Npc1l1Q6T3U4 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Npc1l1Q6T3U4 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Npc1l1Q6T3U4 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Npc1l1Q6T3U4 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Npc1l1Q6T3U4 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Npc1l1Q6T3U4 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Npc1l1Q6T3U4 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.41
Npc1l1Q6T3U4 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Npc1l1Q6T3U4 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Npc1l1Q6T3U4 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Npc1l1Q6T3U4 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC17.58■□□□□ 0.4
Npc1l1Q6T3U4 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Npc1l1Q6T3U4 Gm28630-201ENSMUST00000187806 498 ntBASIC17.58■□□□□ 0.4
Npc1l1Q6T3U4 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Npc1l1Q6T3U4 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Npc1l1Q6T3U4 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Npc1l1Q6T3U4 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Npc1l1Q6T3U4 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Npc1l1Q6T3U4 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Npc1l1Q6T3U4 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Npc1l1Q6T3U4 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Npc1l1Q6T3U4 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC17.58■□□□□ 0.4
Npc1l1Q6T3U4 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Npc1l1Q6T3U4 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Npc1l1Q6T3U4 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.58■□□□□ 0.4
Npc1l1Q6T3U4 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Npc1l1Q6T3U4 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Npc1l1Q6T3U4 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
Npc1l1Q6T3U4 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Npc1l1Q6T3U4 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms