Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn9aQ62205 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn9aQ62205 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn9aQ62205 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scn9aQ62205 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn9aQ62205 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Scn9aQ62205 Olfr582-201ENSMUST00000098212 960 ntBASIC17.06■□□□□ 0.32
Scn9aQ62205 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scn9aQ62205 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn9aQ62205 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn9aQ62205 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Scn9aQ62205 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn9aQ62205 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Scn9aQ62205 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn9aQ62205 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Scn9aQ62205 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Scn9aQ62205 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.06■□□□□ 0.32
Scn9aQ62205 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn9aQ62205 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn9aQ62205 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn9aQ62205 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn9aQ62205 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.06■□□□□ 0.32
Scn9aQ62205 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn9aQ62205 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC17.06■□□□□ 0.32
Scn9aQ62205 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC17.06■□□□□ 0.32
Scn9aQ62205 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC17.06■□□□□ 0.32
Scn9aQ62205 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Scn9aQ62205 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC17.06■□□□□ 0.32
Scn9aQ62205 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC17.06■□□□□ 0.32
Scn9aQ62205 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scn9aQ62205 Gm9252-201ENSMUST00000172364 1602 ntBASIC17.05■□□□□ 0.32
Scn9aQ62205 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Scn9aQ62205 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scn9aQ62205 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.05■□□□□ 0.32
Scn9aQ62205 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scn9aQ62205 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn9aQ62205 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Scn9aQ62205 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn9aQ62205 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Scn9aQ62205 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn9aQ62205 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scn9aQ62205 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn9aQ62205 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Scn9aQ62205 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn9aQ62205 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scn9aQ62205 Gm6283-201ENSMUST00000182369 1000 ntBASIC17.05■□□□□ 0.32
Scn9aQ62205 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn9aQ62205 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn9aQ62205 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scn9aQ62205 Gm8775-201ENSMUST00000170943 1327 ntBASIC17.05■□□□□ 0.32
Scn9aQ62205 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Scn9aQ62205 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Scn9aQ62205 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn9aQ62205 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC17.04■□□□□ 0.32
Scn9aQ62205 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC17.04■□□□□ 0.32
Scn9aQ62205 Gm24196-201ENSMUST00000179161 110 ntBASIC17.04■□□□□ 0.32
Scn9aQ62205 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Scn9aQ62205 AC155258.1-201ENSMUST00000219303 253 ntBASIC17.04■□□□□ 0.32
Scn9aQ62205 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Scn9aQ62205 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn9aQ62205 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Scn9aQ62205 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Scn9aQ62205 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Scn9aQ62205 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn9aQ62205 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn9aQ62205 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
Scn9aQ62205 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Scn9aQ62205 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC17.04■□□□□ 0.32
Scn9aQ62205 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Scn9aQ62205 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Scn9aQ62205 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC17.04■□□□□ 0.32
Scn9aQ62205 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn9aQ62205 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn9aQ62205 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn9aQ62205 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn9aQ62205 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn9aQ62205 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.04■□□□□ 0.32
Scn9aQ62205 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Scn9aQ62205 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
Scn9aQ62205 Gm8652-201ENSMUST00000181363 964 ntBASIC17.04■□□□□ 0.32
Scn9aQ62205 Gm27486-201ENSMUST00000184923 80 ntBASIC17.04■□□□□ 0.32
Scn9aQ62205 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC17.04■□□□□ 0.32
Scn9aQ62205 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn9aQ62205 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn9aQ62205 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Scn9aQ62205 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn9aQ62205 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn9aQ62205 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn9aQ62205 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Scn9aQ62205 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC17.03■□□□□ 0.32
Scn9aQ62205 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn9aQ62205 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn9aQ62205 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC17.03■□□□□ 0.32
Scn9aQ62205 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Scn9aQ62205 Gm7287-201ENSMUST00000205267 602 ntBASIC17.03■□□□□ 0.32
Scn9aQ62205 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Scn9aQ62205 Gm5425-201ENSMUST00000214125 459 ntBASIC17.03■□□□□ 0.32
Scn9aQ62205 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Scn9aQ62205 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.03■□□□□ 0.32
Scn9aQ62205 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms