Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Gm15358-201ENSMUST00000119249 520 ntBASIC13.84□□□□□ -0.19
Sox17Q61473 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox17Q61473 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Sox17Q61473 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Sox17Q61473 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Sox17Q61473 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Sox17Q61473 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox17Q61473 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox17Q61473 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Sox17Q61473 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox17Q61473 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.84□□□□□ -0.19
Sox17Q61473 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox17Q61473 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox17Q61473 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Sox17Q61473 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Sox17Q61473 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox17Q61473 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox17Q61473 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Sox17Q61473 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Sox17Q61473 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sox17Q61473 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox17Q61473 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox17Q61473 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox17Q61473 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.84□□□□□ -0.19
Sox17Q61473 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox17Q61473 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sox17Q61473 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sox17Q61473 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.19
Sox17Q61473 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
Sox17Q61473 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Sox17Q61473 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.19
Sox17Q61473 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox17Q61473 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.83□□□□□ -0.2
Sox17Q61473 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.83□□□□□ -0.2
Sox17Q61473 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox17Q61473 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox17Q61473 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox17Q61473 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox17Q61473 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox17Q61473 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.83□□□□□ -0.2
Sox17Q61473 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox17Q61473 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.83□□□□□ -0.2
Sox17Q61473 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sox17Q61473 Gm43767-201ENSMUST00000198933 381 ntBASIC13.83□□□□□ -0.2
Sox17Q61473 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox17Q61473 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox17Q61473 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Sox17Q61473 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox17Q61473 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Sox17Q61473 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox17Q61473 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox17Q61473 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox17Q61473 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox17Q61473 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.83□□□□□ -0.2
Sox17Q61473 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox17Q61473 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox17Q61473 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sox17Q61473 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox17Q61473 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox17Q61473 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
Sox17Q61473 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox17Q61473 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sox17Q61473 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox17Q61473 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Sox17Q61473 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.83□□□□□ -0.2
Sox17Q61473 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox17Q61473 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sox17Q61473 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox17Q61473 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox17Q61473 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox17Q61473 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox17Q61473 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sox17Q61473 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.82□□□□□ -0.2
Sox17Q61473 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox17Q61473 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Sox17Q61473 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox17Q61473 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox17Q61473 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.82□□□□□ -0.2
Sox17Q61473 Gm12497-201ENSMUST00000138778 237 ntBASIC13.82□□□□□ -0.2
Sox17Q61473 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sox17Q61473 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox17Q61473 Gm10231-201ENSMUST00000181584 441 ntBASIC13.82□□□□□ -0.2
Sox17Q61473 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox17Q61473 Gm10175-202ENSMUST00000208752 441 ntBASIC13.82□□□□□ -0.2
Sox17Q61473 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox17Q61473 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.82□□□□□ -0.2
Sox17Q61473 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sox17Q61473 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox17Q61473 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox17Q61473 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox17Q61473 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox17Q61473 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.82□□□□□ -0.2
Sox17Q61473 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox17Q61473 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox17Q61473 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox17Q61473 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox17Q61473 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sox17Q61473 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sox17Q61473 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sox17Q61473 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms