Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scarb1Q61009 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scarb1Q61009 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scarb1Q61009 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scarb1Q61009 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scarb1Q61009 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scarb1Q61009 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.44□□□□□ -0.42
Scarb1Q61009 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.44□□□□□ -0.42
Scarb1Q61009 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.44□□□□□ -0.42
Scarb1Q61009 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.44□□□□□ -0.42
Scarb1Q61009 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Scarb1Q61009 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scarb1Q61009 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scarb1Q61009 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.44□□□□□ -0.42
Scarb1Q61009 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Scarb1Q61009 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scarb1Q61009 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.44□□□□□ -0.42
Scarb1Q61009 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Scarb1Q61009 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scarb1Q61009 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Scarb1Q61009 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scarb1Q61009 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scarb1Q61009 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scarb1Q61009 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Scarb1Q61009 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scarb1Q61009 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scarb1Q61009 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scarb1Q61009 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scarb1Q61009 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scarb1Q61009 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scarb1Q61009 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scarb1Q61009 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.43□□□□□ -0.42
Scarb1Q61009 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scarb1Q61009 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.43□□□□□ -0.42
Scarb1Q61009 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scarb1Q61009 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.43□□□□□ -0.42
Scarb1Q61009 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scarb1Q61009 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Scarb1Q61009 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Scarb1Q61009 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scarb1Q61009 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scarb1Q61009 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Scarb1Q61009 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Scarb1Q61009 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.43□□□□□ -0.42
Scarb1Q61009 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Scarb1Q61009 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Scarb1Q61009 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.42□□□□□ -0.42
Scarb1Q61009 Celf4-206ENSMUST00000224553 1729 ntBASIC12.42□□□□□ -0.42
Scarb1Q61009 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scarb1Q61009 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scarb1Q61009 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scarb1Q61009 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Scarb1Q61009 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Scarb1Q61009 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scarb1Q61009 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Scarb1Q61009 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scarb1Q61009 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Scarb1Q61009 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Scarb1Q61009 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Scarb1Q61009 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Scarb1Q61009 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Scarb1Q61009 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Scarb1Q61009 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Scarb1Q61009 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scarb1Q61009 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.42□□□□□ -0.42
Scarb1Q61009 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scarb1Q61009 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.42□□□□□ -0.42
Scarb1Q61009 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Scarb1Q61009 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scarb1Q61009 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scarb1Q61009 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scarb1Q61009 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scarb1Q61009 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scarb1Q61009 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scarb1Q61009 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.42□□□□□ -0.42
Scarb1Q61009 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Scarb1Q61009 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Scarb1Q61009 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Scarb1Q61009 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scarb1Q61009 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scarb1Q61009 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scarb1Q61009 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scarb1Q61009 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.41□□□□□ -0.42
Scarb1Q61009 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scarb1Q61009 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scarb1Q61009 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Scarb1Q61009 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scarb1Q61009 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scarb1Q61009 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scarb1Q61009 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scarb1Q61009 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scarb1Q61009 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scarb1Q61009 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Scarb1Q61009 Gm12008-201ENSMUST00000117791 755 ntBASIC12.41□□□□□ -0.42
Scarb1Q61009 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scarb1Q61009 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scarb1Q61009 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Scarb1Q61009 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Scarb1Q61009 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Scarb1Q61009 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms