Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Xrcc1Q60596 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Xrcc1Q60596 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Xrcc1Q60596 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Xrcc1Q60596 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Xrcc1Q60596 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Xrcc1Q60596 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Xrcc1Q60596 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Xrcc1Q60596 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Xrcc1Q60596 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Xrcc1Q60596 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Xrcc1Q60596 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Xrcc1Q60596 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.08□□□□□ -0.15
Xrcc1Q60596 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.08□□□□□ -0.15
Xrcc1Q60596 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Xrcc1Q60596 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Xrcc1Q60596 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Xrcc1Q60596 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.08□□□□□ -0.16
Xrcc1Q60596 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Xrcc1Q60596 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.08□□□□□ -0.16
Xrcc1Q60596 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Xrcc1Q60596 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
Xrcc1Q60596 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.08□□□□□ -0.16
Xrcc1Q60596 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Xrcc1Q60596 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Xrcc1Q60596 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Xrcc1Q60596 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Xrcc1Q60596 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Xrcc1Q60596 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Xrcc1Q60596 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.08□□□□□ -0.16
Xrcc1Q60596 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Xrcc1Q60596 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.08□□□□□ -0.16
Xrcc1Q60596 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.08□□□□□ -0.16
Xrcc1Q60596 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Xrcc1Q60596 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Xrcc1Q60596 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Xrcc1Q60596 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Xrcc1Q60596 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Xrcc1Q60596 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.08□□□□□ -0.16
Xrcc1Q60596 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Xrcc1Q60596 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Xrcc1Q60596 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Xrcc1Q60596 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Xrcc1Q60596 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Xrcc1Q60596 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.08□□□□□ -0.16
Xrcc1Q60596 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Xrcc1Q60596 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Xrcc1Q60596 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Xrcc1Q60596 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Xrcc1Q60596 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Xrcc1Q60596 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Xrcc1Q60596 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Xrcc1Q60596 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Xrcc1Q60596 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Xrcc1Q60596 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Xrcc1Q60596 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Xrcc1Q60596 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.08□□□□□ -0.16
Xrcc1Q60596 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Xrcc1Q60596 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Xrcc1Q60596 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Xrcc1Q60596 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.07□□□□□ -0.16
Xrcc1Q60596 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.07□□□□□ -0.16
Xrcc1Q60596 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Xrcc1Q60596 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Xrcc1Q60596 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Xrcc1Q60596 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Xrcc1Q60596 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Xrcc1Q60596 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Xrcc1Q60596 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.07□□□□□ -0.16
Xrcc1Q60596 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.07□□□□□ -0.16
Xrcc1Q60596 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.07□□□□□ -0.16
Xrcc1Q60596 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Xrcc1Q60596 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Xrcc1Q60596 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Xrcc1Q60596 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Xrcc1Q60596 Gm26308-201ENSMUST00000157768 69 ntBASIC14.07□□□□□ -0.16
Xrcc1Q60596 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.07□□□□□ -0.16
Xrcc1Q60596 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Xrcc1Q60596 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Xrcc1Q60596 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.07□□□□□ -0.16
Xrcc1Q60596 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.07□□□□□ -0.16
Xrcc1Q60596 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Xrcc1Q60596 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Xrcc1Q60596 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.07□□□□□ -0.16
Xrcc1Q60596 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Xrcc1Q60596 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Xrcc1Q60596 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Xrcc1Q60596 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Xrcc1Q60596 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Xrcc1Q60596 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Xrcc1Q60596 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Xrcc1Q60596 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Xrcc1Q60596 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Xrcc1Q60596 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Xrcc1Q60596 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Xrcc1Q60596 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Xrcc1Q60596 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Xrcc1Q60596 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Xrcc1Q60596 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Xrcc1Q60596 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms