Protein–RNA interactions for Protein: Q5F4S9

Trpm3, Transient receptor potential cation channel, subfamily M, member 3, mousemouse

Predictions only

Length 1,721 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm3Q5F4S9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trpm3Q5F4S9 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Trpm3Q5F4S9 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trpm3Q5F4S9 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trpm3Q5F4S9 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trpm3Q5F4S9 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC18.39■□□□□ 0.53
Trpm3Q5F4S9 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trpm3Q5F4S9 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trpm3Q5F4S9 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trpm3Q5F4S9 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trpm3Q5F4S9 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC18.39■□□□□ 0.53
Trpm3Q5F4S9 Gm5425-201ENSMUST00000214125 459 ntBASIC18.39■□□□□ 0.53
Trpm3Q5F4S9 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trpm3Q5F4S9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trpm3Q5F4S9 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trpm3Q5F4S9 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trpm3Q5F4S9 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trpm3Q5F4S9 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Trpm3Q5F4S9 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trpm3Q5F4S9 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trpm3Q5F4S9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trpm3Q5F4S9 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trpm3Q5F4S9 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC18.38■□□□□ 0.53
Trpm3Q5F4S9 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC18.38■□□□□ 0.53
Trpm3Q5F4S9 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC18.38■□□□□ 0.53
Trpm3Q5F4S9 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Trpm3Q5F4S9 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trpm3Q5F4S9 Gm28760-201ENSMUST00000185995 736 ntBASIC18.38■□□□□ 0.53
Trpm3Q5F4S9 Ighv8-14-201ENSMUST00000196781 358 ntBASIC18.38■□□□□ 0.53
Trpm3Q5F4S9 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Trpm3Q5F4S9 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Trpm3Q5F4S9 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trpm3Q5F4S9 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trpm3Q5F4S9 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trpm3Q5F4S9 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trpm3Q5F4S9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Trpm3Q5F4S9 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trpm3Q5F4S9 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC18.38■□□□□ 0.53
Trpm3Q5F4S9 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trpm3Q5F4S9 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trpm3Q5F4S9 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Trpm3Q5F4S9 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm3Q5F4S9 Gm9908-201ENSMUST00000211534 448 ntBASIC18.37■□□□□ 0.53
Trpm3Q5F4S9 AC153962.4-201ENSMUST00000217878 242 ntBASIC18.37■□□□□ 0.53
Trpm3Q5F4S9 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm3Q5F4S9 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm3Q5F4S9 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm3Q5F4S9 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm3Q5F4S9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm3Q5F4S9 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Trpm3Q5F4S9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.37■□□□□ 0.53
Trpm3Q5F4S9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm3Q5F4S9 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm3Q5F4S9 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm3Q5F4S9 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm3Q5F4S9 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm3Q5F4S9 Gm4971-201ENSMUST00000205991 1108 ntBASIC18.37■□□□□ 0.53
Trpm3Q5F4S9 Gm6007-201ENSMUST00000208170 823 ntBASIC18.37■□□□□ 0.53
Trpm3Q5F4S9 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC18.37■□□□□ 0.53
Trpm3Q5F4S9 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm3Q5F4S9 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm3Q5F4S9 Gm14452-201ENSMUST00000118680 1632 ntBASIC18.37■□□□□ 0.53
Trpm3Q5F4S9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm3Q5F4S9 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trpm3Q5F4S9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.36■□□□□ 0.53
Trpm3Q5F4S9 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC18.36■□□□□ 0.53
Trpm3Q5F4S9 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm3Q5F4S9 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm3Q5F4S9 Gm45630-201ENSMUST00000210243 1911 ntBASIC18.36■□□□□ 0.53
Trpm3Q5F4S9 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Trpm3Q5F4S9 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm3Q5F4S9 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm3Q5F4S9 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm3Q5F4S9 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Trpm3Q5F4S9 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm3Q5F4S9 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC18.36■□□□□ 0.53
Trpm3Q5F4S9 Gm8602-201ENSMUST00000184045 607 ntBASIC18.36■□□□□ 0.53
Trpm3Q5F4S9 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC18.36■□□□□ 0.53
Trpm3Q5F4S9 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm3Q5F4S9 Gm18027-201ENSMUST00000218947 619 ntBASIC18.36■□□□□ 0.53
Trpm3Q5F4S9 AC139580.1-202ENSMUST00000223574 928 ntBASIC18.36■□□□□ 0.53
Trpm3Q5F4S9 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm3Q5F4S9 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm3Q5F4S9 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm3Q5F4S9 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm3Q5F4S9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm3Q5F4S9 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm3Q5F4S9 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Trpm3Q5F4S9 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm3Q5F4S9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trpm3Q5F4S9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.35■□□□□ 0.53
Trpm3Q5F4S9 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Trpm3Q5F4S9 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Trpm3Q5F4S9 Gm15678-201ENSMUST00000117573 960 ntBASIC18.35■□□□□ 0.53
Trpm3Q5F4S9 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC18.35■□□□□ 0.53
Trpm3Q5F4S9 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Trpm3Q5F4S9 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Trpm3Q5F4S9 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC18.35■□□□□ 0.53
Trpm3Q5F4S9 Gm37714-201ENSMUST00000194742 342 ntBASIC18.35■□□□□ 0.53
Trpm3Q5F4S9 AC139350.3-201ENSMUST00000226151 420 ntBASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms