Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Gm8318-201ENSMUST00000182954 872 ntBASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Gm5864-201ENSMUST00000202263 970 ntBASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Gm9172-201ENSMUST00000212092 954 ntBASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa3Q3UPR0 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Shisa3Q3UPR0 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shisa3Q3UPR0 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.71□□□□□ -0.37
Shisa3Q3UPR0 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shisa3Q3UPR0 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.71□□□□□ -0.37
Shisa3Q3UPR0 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shisa3Q3UPR0 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shisa3Q3UPR0 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shisa3Q3UPR0 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Shisa3Q3UPR0 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shisa3Q3UPR0 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shisa3Q3UPR0 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shisa3Q3UPR0 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Shisa3Q3UPR0 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shisa3Q3UPR0 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Shisa3Q3UPR0 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.71□□□□□ -0.37
Shisa3Q3UPR0 Gm44882-201ENSMUST00000205702 802 ntBASIC12.71□□□□□ -0.37
Shisa3Q3UPR0 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shisa3Q3UPR0 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shisa3Q3UPR0 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shisa3Q3UPR0 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shisa3Q3UPR0 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Shisa3Q3UPR0 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Shisa3Q3UPR0 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shisa3Q3UPR0 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shisa3Q3UPR0 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shisa3Q3UPR0 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.38
Shisa3Q3UPR0 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shisa3Q3UPR0 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shisa3Q3UPR0 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Shisa3Q3UPR0 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa3Q3UPR0 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa3Q3UPR0 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Shisa3Q3UPR0 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa3Q3UPR0 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa3Q3UPR0 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa3Q3UPR0 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa3Q3UPR0 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa3Q3UPR0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa3Q3UPR0 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.7□□□□□ -0.38
Shisa3Q3UPR0 Gm11452-201ENSMUST00000122376 690 ntBASIC12.7□□□□□ -0.38
Shisa3Q3UPR0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.7□□□□□ -0.38
Shisa3Q3UPR0 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa3Q3UPR0 Mir8098-201ENSMUST00000184011 137 ntBASIC12.7□□□□□ -0.38
Shisa3Q3UPR0 Gm28659-201ENSMUST00000188013 759 ntBASIC12.7□□□□□ -0.38
Shisa3Q3UPR0 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.7□□□□□ -0.38
Shisa3Q3UPR0 Gm7461-201ENSMUST00000058918 827 ntBASIC12.7□□□□□ -0.38
Shisa3Q3UPR0 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa3Q3UPR0 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Shisa3Q3UPR0 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa3Q3UPR0 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa3Q3UPR0 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa3Q3UPR0 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa3Q3UPR0 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa3Q3UPR0 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa3Q3UPR0 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.7□□□□□ -0.38
Shisa3Q3UPR0 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa3Q3UPR0 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa3Q3UPR0 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa3Q3UPR0 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa3Q3UPR0 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa3Q3UPR0 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.7□□□□□ -0.38
Shisa3Q3UPR0 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa3Q3UPR0 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Shisa3Q3UPR0 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shisa3Q3UPR0 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shisa3Q3UPR0 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Shisa3Q3UPR0 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Shisa3Q3UPR0 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Shisa3Q3UPR0 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms