Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp25Q3U435 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp25Q3U435 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.86□□□□□ -0.19
Mmp25Q3U435 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp25Q3U435 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Mmp25Q3U435 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Mmp25Q3U435 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp25Q3U435 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp25Q3U435 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp25Q3U435 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.86□□□□□ -0.19
Mmp25Q3U435 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.86□□□□□ -0.19
Mmp25Q3U435 Gm5479-201ENSMUST00000160578 435 ntBASIC13.86□□□□□ -0.19
Mmp25Q3U435 Gm43125-201ENSMUST00000201724 730 ntBASIC13.86□□□□□ -0.19
Mmp25Q3U435 Gm45098-201ENSMUST00000207179 657 ntBASIC13.86□□□□□ -0.19
Mmp25Q3U435 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.86□□□□□ -0.19
Mmp25Q3U435 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp25Q3U435 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.86□□□□□ -0.19
Mmp25Q3U435 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp25Q3U435 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp25Q3U435 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp25Q3U435 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp25Q3U435 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.86□□□□□ -0.19
Mmp25Q3U435 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp25Q3U435 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp25Q3U435 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp25Q3U435 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp25Q3U435 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp25Q3U435 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp25Q3U435 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Mmp25Q3U435 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp25Q3U435 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Mmp25Q3U435 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp25Q3U435 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.85□□□□□ -0.19
Mmp25Q3U435 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp25Q3U435 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp25Q3U435 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp25Q3U435 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp25Q3U435 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp25Q3U435 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Mmp25Q3U435 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp25Q3U435 Gm25287-201ENSMUST00000103846 110 ntBASIC13.85□□□□□ -0.19
Mmp25Q3U435 Gm22918-201ENSMUST00000103855 110 ntBASIC13.85□□□□□ -0.19
Mmp25Q3U435 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Mmp25Q3U435 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.85□□□□□ -0.19
Mmp25Q3U435 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.85□□□□□ -0.19
Mmp25Q3U435 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.85□□□□□ -0.19
Mmp25Q3U435 Gm38225-201ENSMUST00000194001 393 ntBASIC13.85□□□□□ -0.19
Mmp25Q3U435 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp25Q3U435 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.85□□□□□ -0.19
Mmp25Q3U435 Gm9182-201ENSMUST00000217829 639 ntBASIC13.85□□□□□ -0.19
Mmp25Q3U435 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp25Q3U435 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.85□□□□□ -0.19
Mmp25Q3U435 Gm8396-201ENSMUST00000057361 823 ntBASIC13.85□□□□□ -0.19
Mmp25Q3U435 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp25Q3U435 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Mmp25Q3U435 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp25Q3U435 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp25Q3U435 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp25Q3U435 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Mmp25Q3U435 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp25Q3U435 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp25Q3U435 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp25Q3U435 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp25Q3U435 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp25Q3U435 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp25Q3U435 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp25Q3U435 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.85□□□□□ -0.19
Mmp25Q3U435 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp25Q3U435 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Mmp25Q3U435 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp25Q3U435 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp25Q3U435 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp25Q3U435 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp25Q3U435 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp25Q3U435 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp25Q3U435 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp25Q3U435 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp25Q3U435 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp25Q3U435 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp25Q3U435 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.84□□□□□ -0.19
Mmp25Q3U435 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp25Q3U435 Gm43474-201ENSMUST00000196415 774 ntBASIC13.84□□□□□ -0.19
Mmp25Q3U435 Olfr286-202ENSMUST00000205305 969 ntBASIC13.84□□□□□ -0.19
Mmp25Q3U435 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp25Q3U435 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Mmp25Q3U435 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp25Q3U435 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp25Q3U435 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp25Q3U435 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp25Q3U435 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp25Q3U435 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp25Q3U435 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp25Q3U435 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp25Q3U435 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp25Q3U435 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp25Q3U435 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp25Q3U435 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp25Q3U435 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Mmp25Q3U435 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Mmp25Q3U435 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms