Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim63Q38HM4 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim63Q38HM4 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Trim63Q38HM4 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim63Q38HM4 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim63Q38HM4 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim63Q38HM4 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim63Q38HM4 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim63Q38HM4 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim63Q38HM4 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trim63Q38HM4 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trim63Q38HM4 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim63Q38HM4 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trim63Q38HM4 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim63Q38HM4 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trim63Q38HM4 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim63Q38HM4 Gm6190-201ENSMUST00000220683 1374 ntBASIC12.16□□□□□ -0.46
Trim63Q38HM4 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trim63Q38HM4 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.16□□□□□ -0.46
Trim63Q38HM4 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trim63Q38HM4 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim63Q38HM4 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim63Q38HM4 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim63Q38HM4 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim63Q38HM4 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trim63Q38HM4 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.15□□□□□ -0.46
Trim63Q38HM4 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim63Q38HM4 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim63Q38HM4 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim63Q38HM4 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim63Q38HM4 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim63Q38HM4 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim63Q38HM4 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trim63Q38HM4 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim63Q38HM4 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim63Q38HM4 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trim63Q38HM4 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim63Q38HM4 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim63Q38HM4 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim63Q38HM4 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim63Q38HM4 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim63Q38HM4 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Trim63Q38HM4 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim63Q38HM4 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim63Q38HM4 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim63Q38HM4 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trim63Q38HM4 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trim63Q38HM4 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Trim63Q38HM4 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trim63Q38HM4 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trim63Q38HM4 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trim63Q38HM4 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trim63Q38HM4 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim63Q38HM4 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim63Q38HM4 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim63Q38HM4 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim63Q38HM4 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim63Q38HM4 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim63Q38HM4 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim63Q38HM4 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim63Q38HM4 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim63Q38HM4 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim63Q38HM4 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim63Q38HM4 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim63Q38HM4 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.14□□□□□ -0.47
Trim63Q38HM4 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim63Q38HM4 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim63Q38HM4 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim63Q38HM4 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim63Q38HM4 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim63Q38HM4 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim63Q38HM4 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim63Q38HM4 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC12.14□□□□□ -0.47
Trim63Q38HM4 Gm15375-201ENSMUST00000119510 849 ntBASIC12.14□□□□□ -0.47
Trim63Q38HM4 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Trim63Q38HM4 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.14□□□□□ -0.47
Trim63Q38HM4 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trim63Q38HM4 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC12.14□□□□□ -0.47
Trim63Q38HM4 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.14□□□□□ -0.47
Trim63Q38HM4 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim63Q38HM4 Gm44549-201ENSMUST00000208351 577 ntBASIC12.14□□□□□ -0.47
Trim63Q38HM4 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.14□□□□□ -0.47
Trim63Q38HM4 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC12.14□□□□□ -0.47
Trim63Q38HM4 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trim63Q38HM4 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim63Q38HM4 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim63Q38HM4 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim63Q38HM4 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim63Q38HM4 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim63Q38HM4 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.14□□□□□ -0.47
Trim63Q38HM4 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trim63Q38HM4 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trim63Q38HM4 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim63Q38HM4 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trim63Q38HM4 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trim63Q38HM4 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trim63Q38HM4 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim63Q38HM4 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim63Q38HM4 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim63Q38HM4 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms