Protein–RNA interactions for Protein: P97390

Vps45, Vacuolar protein sorting-associated protein 45, mousemouse

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps45P97390 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps45P97390 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps45P97390 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps45P97390 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
Vps45P97390 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps45P97390 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps45P97390 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.21■□□□□ 0.03
Vps45P97390 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.21■□□□□ 0.03
Vps45P97390 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.21■□□□□ 0.03
Vps45P97390 Thap2-203ENSMUST00000218989 527 ntBASIC15.21■□□□□ 0.03
Vps45P97390 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps45P97390 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps45P97390 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps45P97390 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Vps45P97390 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Vps45P97390 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Vps45P97390 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Vps45P97390 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Vps45P97390 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Vps45P97390 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Vps45P97390 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps45P97390 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps45P97390 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps45P97390 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps45P97390 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps45P97390 Carlr-201ENSMUST00000181515 2574 ntBASIC15.2■□□□□ 0.02
Vps45P97390 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps45P97390 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps45P97390 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC15.2■□□□□ 0.02
Vps45P97390 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.2■□□□□ 0.02
Vps45P97390 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps45P97390 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps45P97390 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps45P97390 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.2■□□□□ 0.02
Vps45P97390 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.2■□□□□ 0.02
Vps45P97390 Gm18889-201ENSMUST00000174284 929 ntBASIC15.2■□□□□ 0.02
Vps45P97390 Gm22175-201ENSMUST00000175007 78 ntBASIC15.2■□□□□ 0.02
Vps45P97390 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps45P97390 Gm2272-201ENSMUST00000194903 582 ntBASIC15.2■□□□□ 0.02
Vps45P97390 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.2■□□□□ 0.02
Vps45P97390 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.2■□□□□ 0.02
Vps45P97390 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC15.2■□□□□ 0.02
Vps45P97390 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.2■□□□□ 0.02
Vps45P97390 CT025535.1-201ENSMUST00000227172 491 ntBASIC15.2■□□□□ 0.02
Vps45P97390 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.2■□□□□ 0.02
Vps45P97390 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps45P97390 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps45P97390 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps45P97390 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps45P97390 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Vps45P97390 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps45P97390 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps45P97390 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps45P97390 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps45P97390 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps45P97390 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps45P97390 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps45P97390 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps45P97390 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps45P97390 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.19■□□□□ 0.02
Vps45P97390 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vps45P97390 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps45P97390 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vps45P97390 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Vps45P97390 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps45P97390 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.19■□□□□ 0.02
Vps45P97390 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vps45P97390 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps45P97390 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Vps45P97390 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Vps45P97390 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps45P97390 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Vps45P97390 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps45P97390 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps45P97390 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.19■□□□□ 0.02
Vps45P97390 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.19■□□□□ 0.02
Vps45P97390 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC15.19■□□□□ 0.02
Vps45P97390 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Vps45P97390 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.19■□□□□ 0.02
Vps45P97390 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.19■□□□□ 0.02
Vps45P97390 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Vps45P97390 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.19■□□□□ 0.02
Vps45P97390 Gm27430-201ENSMUST00000184585 107 ntBASIC15.19■□□□□ 0.02
Vps45P97390 Gm44333-201ENSMUST00000197168 107 ntBASIC15.19■□□□□ 0.02
Vps45P97390 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.19■□□□□ 0.02
Vps45P97390 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.19■□□□□ 0.02
Vps45P97390 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps45P97390 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps45P97390 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vps45P97390 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps45P97390 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps45P97390 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps45P97390 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps45P97390 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps45P97390 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps45P97390 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Vps45P97390 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Vps45P97390 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps45P97390 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps45P97390 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms