Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SgcbP82349 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SgcbP82349 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SgcbP82349 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SgcbP82349 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SgcbP82349 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SgcbP82349 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.13□□□□□ -0.31
SgcbP82349 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SgcbP82349 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SgcbP82349 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SgcbP82349 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SgcbP82349 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SgcbP82349 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.13□□□□□ -0.31
SgcbP82349 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SgcbP82349 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SgcbP82349 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SgcbP82349 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SgcbP82349 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SgcbP82349 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcbP82349 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcbP82349 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
SgcbP82349 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcbP82349 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcbP82349 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcbP82349 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcbP82349 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
SgcbP82349 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcbP82349 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcbP82349 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SgcbP82349 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcbP82349 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SgcbP82349 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
SgcbP82349 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SgcbP82349 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.12□□□□□ -0.31
SgcbP82349 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.12□□□□□ -0.31
SgcbP82349 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcbP82349 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.12□□□□□ -0.31
SgcbP82349 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcbP82349 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcbP82349 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcbP82349 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcbP82349 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.12□□□□□ -0.31
SgcbP82349 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcbP82349 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcbP82349 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcbP82349 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcbP82349 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SgcbP82349 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
SgcbP82349 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcbP82349 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SgcbP82349 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcbP82349 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SgcbP82349 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SgcbP82349 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcbP82349 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SgcbP82349 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SgcbP82349 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SgcbP82349 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SgcbP82349 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SgcbP82349 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SgcbP82349 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SgcbP82349 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SgcbP82349 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SgcbP82349 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SgcbP82349 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.11□□□□□ -0.31
SgcbP82349 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
SgcbP82349 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SgcbP82349 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SgcbP82349 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SgcbP82349 Gm20553-201ENSMUST00000204205 844 ntBASIC13.11□□□□□ -0.31
SgcbP82349 Gm18057-201ENSMUST00000208220 503 ntBASIC13.11□□□□□ -0.31
SgcbP82349 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
SgcbP82349 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.11□□□□□ -0.31
SgcbP82349 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SgcbP82349 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SgcbP82349 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SgcbP82349 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.11□□□□□ -0.31
SgcbP82349 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SgcbP82349 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SgcbP82349 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.11□□□□□ -0.31
SgcbP82349 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.11□□□□□ -0.31
SgcbP82349 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.11□□□□□ -0.31
SgcbP82349 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SgcbP82349 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SgcbP82349 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SgcbP82349 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SgcbP82349 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SgcbP82349 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SgcbP82349 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SgcbP82349 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SgcbP82349 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SgcbP82349 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.11□□□□□ -0.31
SgcbP82349 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
SgcbP82349 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SgcbP82349 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SgcbP82349 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SgcbP82349 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SgcbP82349 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.1□□□□□ -0.31
SgcbP82349 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SgcbP82349 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms