Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdlim4P70271 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdlim4P70271 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdlim4P70271 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdlim4P70271 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdlim4P70271 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdlim4P70271 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pdlim4P70271 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim4P70271 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim4P70271 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim4P70271 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Pdlim4P70271 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim4P70271 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim4P70271 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim4P70271 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Pdlim4P70271 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.26□□□□□ -0.45
Pdlim4P70271 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim4P70271 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim4P70271 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim4P70271 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Pdlim4P70271 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.26□□□□□ -0.45
Pdlim4P70271 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim4P70271 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.26□□□□□ -0.45
Pdlim4P70271 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Pdlim4P70271 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.26□□□□□ -0.45
Pdlim4P70271 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim4P70271 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.26□□□□□ -0.45
Pdlim4P70271 Gm43767-201ENSMUST00000198933 381 ntBASIC12.26□□□□□ -0.45
Pdlim4P70271 Thap2-203ENSMUST00000218989 527 ntBASIC12.26□□□□□ -0.45
Pdlim4P70271 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.26□□□□□ -0.45
Pdlim4P70271 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim4P70271 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.26□□□□□ -0.45
Pdlim4P70271 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim4P70271 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim4P70271 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Pdlim4P70271 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Pdlim4P70271 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim4P70271 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim4P70271 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim4P70271 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim4P70271 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim4P70271 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim4P70271 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Pdlim4P70271 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim4P70271 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim4P70271 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim4P70271 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim4P70271 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pdlim4P70271 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Pdlim4P70271 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim4P70271 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim4P70271 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim4P70271 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim4P70271 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim4P70271 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim4P70271 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim4P70271 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.25□□□□□ -0.45
Pdlim4P70271 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim4P70271 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim4P70271 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim4P70271 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim4P70271 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim4P70271 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim4P70271 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.25□□□□□ -0.45
Pdlim4P70271 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim4P70271 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Pdlim4P70271 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim4P70271 Gm5177-201ENSMUST00000183092 997 ntBASIC12.25□□□□□ -0.45
Pdlim4P70271 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim4P70271 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.25□□□□□ -0.45
Pdlim4P70271 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC12.25□□□□□ -0.45
Pdlim4P70271 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim4P70271 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim4P70271 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim4P70271 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim4P70271 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Pdlim4P70271 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Pdlim4P70271 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim4P70271 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.25□□□□□ -0.45
Pdlim4P70271 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Pdlim4P70271 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.25□□□□□ -0.45
Pdlim4P70271 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim4P70271 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim4P70271 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.25□□□□□ -0.45
Pdlim4P70271 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim4P70271 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Pdlim4P70271 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim4P70271 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim4P70271 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim4P70271 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim4P70271 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Pdlim4P70271 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim4P70271 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pdlim4P70271 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim4P70271 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pdlim4P70271 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Pdlim4P70271 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim4P70271 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim4P70271 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim4P70271 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms