Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cks1bP61025 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Cks1bP61025 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cks1bP61025 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cks1bP61025 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC10.55□□□□□ -0.72
Cks1bP61025 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cks1bP61025 Gm29257-201ENSMUST00000186115 639 ntBASIC10.55□□□□□ -0.72
Cks1bP61025 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC10.55□□□□□ -0.72
Cks1bP61025 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC10.55□□□□□ -0.72
Cks1bP61025 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cks1bP61025 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cks1bP61025 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC10.55□□□□□ -0.72
Cks1bP61025 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Cks1bP61025 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Cks1bP61025 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Cks1bP61025 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cks1bP61025 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cks1bP61025 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cks1bP61025 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC10.55□□□□□ -0.72
Cks1bP61025 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cks1bP61025 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cks1bP61025 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cks1bP61025 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cks1bP61025 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cks1bP61025 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cks1bP61025 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cks1bP61025 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cks1bP61025 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cks1bP61025 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cks1bP61025 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cks1bP61025 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Cks1bP61025 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.55□□□□□ -0.72
Cks1bP61025 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cks1bP61025 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cks1bP61025 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cks1bP61025 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cks1bP61025 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cks1bP61025 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC10.54□□□□□ -0.72
Cks1bP61025 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cks1bP61025 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.54□□□□□ -0.72
Cks1bP61025 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cks1bP61025 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cks1bP61025 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cks1bP61025 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cks1bP61025 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC10.54□□□□□ -0.72
Cks1bP61025 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cks1bP61025 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Cks1bP61025 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cks1bP61025 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC10.54□□□□□ -0.72
Cks1bP61025 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Cks1bP61025 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC10.54□□□□□ -0.72
Cks1bP61025 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC10.54□□□□□ -0.72
Cks1bP61025 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Cks1bP61025 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cks1bP61025 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC10.54□□□□□ -0.72
Cks1bP61025 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC10.54□□□□□ -0.72
Cks1bP61025 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cks1bP61025 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cks1bP61025 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cks1bP61025 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cks1bP61025 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cks1bP61025 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.54□□□□□ -0.72
Cks1bP61025 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC10.54□□□□□ -0.72
Cks1bP61025 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cks1bP61025 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cks1bP61025 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cks1bP61025 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cks1bP61025 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC10.54□□□□□ -0.72
Cks1bP61025 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Cks1bP61025 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Cks1bP61025 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cks1bP61025 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cks1bP61025 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cks1bP61025 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cks1bP61025 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cks1bP61025 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Cks1bP61025 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cks1bP61025 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cks1bP61025 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Cks1bP61025 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Cks1bP61025 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1bP61025 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Cks1bP61025 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Cks1bP61025 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1bP61025 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1bP61025 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Cks1bP61025 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1bP61025 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1bP61025 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1bP61025 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1bP61025 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1bP61025 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1bP61025 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Cks1bP61025 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1bP61025 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC10.53□□□□□ -0.72
Cks1bP61025 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
Cks1bP61025 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC10.53□□□□□ -0.72
Cks1bP61025 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Cks1bP61025 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Cks1bP61025 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms