Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nphp4P59240 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nphp4P59240 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC19.78■□□□□ 0.76
Nphp4P59240 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nphp4P59240 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nphp4P59240 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Nphp4P59240 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nphp4P59240 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nphp4P59240 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nphp4P59240 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nphp4P59240 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nphp4P59240 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC19.78■□□□□ 0.76
Nphp4P59240 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Nphp4P59240 Gm6912-201ENSMUST00000117218 544 ntBASIC19.77■□□□□ 0.76
Nphp4P59240 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Nphp4P59240 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC19.77■□□□□ 0.76
Nphp4P59240 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nphp4P59240 AC155729.1-201ENSMUST00000227758 544 ntBASIC19.77■□□□□ 0.76
Nphp4P59240 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nphp4P59240 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nphp4P59240 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nphp4P59240 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nphp4P59240 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nphp4P59240 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
Nphp4P59240 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nphp4P59240 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nphp4P59240 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nphp4P59240 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC19.77■□□□□ 0.76
Nphp4P59240 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nphp4P59240 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nphp4P59240 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nphp4P59240 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nphp4P59240 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Nphp4P59240 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Nphp4P59240 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Nphp4P59240 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.75
Nphp4P59240 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC19.76■□□□□ 0.75
Nphp4P59240 Gm28760-201ENSMUST00000185995 736 ntBASIC19.76■□□□□ 0.75
Nphp4P59240 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Nphp4P59240 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC19.76■□□□□ 0.75
Nphp4P59240 Gm9794-201ENSMUST00000202370 423 ntBASIC19.76■□□□□ 0.75
Nphp4P59240 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC19.76■□□□□ 0.75
Nphp4P59240 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Nphp4P59240 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Nphp4P59240 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nphp4P59240 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Nphp4P59240 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nphp4P59240 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nphp4P59240 Gm4081-201ENSMUST00000195287 1838 ntBASIC19.76■□□□□ 0.75
Nphp4P59240 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nphp4P59240 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nphp4P59240 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Nphp4P59240 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nphp4P59240 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC19.76■□□□□ 0.75
Nphp4P59240 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC19.76■□□□□ 0.75
Nphp4P59240 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC19.76■□□□□ 0.75
Nphp4P59240 Gm45668-201ENSMUST00000211271 493 ntBASIC19.76■□□□□ 0.75
Nphp4P59240 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC19.76■□□□□ 0.75
Nphp4P59240 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nphp4P59240 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nphp4P59240 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Nphp4P59240 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nphp4P59240 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC19.76■□□□□ 0.75
Nphp4P59240 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nphp4P59240 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Nphp4P59240 CT010478.1-201ENSMUST00000220747 2787 ntBASIC19.75■□□□□ 0.75
Nphp4P59240 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nphp4P59240 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nphp4P59240 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nphp4P59240 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nphp4P59240 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nphp4P59240 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nphp4P59240 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nphp4P59240 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nphp4P59240 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Nphp4P59240 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Nphp4P59240 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nphp4P59240 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nphp4P59240 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC19.75■□□□□ 0.75
Nphp4P59240 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nphp4P59240 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC19.75■□□□□ 0.75
Nphp4P59240 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nphp4P59240 Gm28631-201ENSMUST00000190740 334 ntBASIC19.75■□□□□ 0.75
Nphp4P59240 Gm31326-201ENSMUST00000191856 1048 ntBASIC19.75■□□□□ 0.75
Nphp4P59240 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nphp4P59240 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC19.75■□□□□ 0.75
Nphp4P59240 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC19.75■□□□□ 0.75
Nphp4P59240 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nphp4P59240 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nphp4P59240 Gm6180-201ENSMUST00000065243 498 ntBASIC19.75■□□□□ 0.75
Nphp4P59240 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nphp4P59240 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nphp4P59240 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC19.74■□□□□ 0.75
Nphp4P59240 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nphp4P59240 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nphp4P59240 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nphp4P59240 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nphp4P59240 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nphp4P59240 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nphp4P59240 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms