Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Vps33bP59016 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps33bP59016 Gm23931-201ENSMUST00000103842 109 ntBASIC18.36■□□□□ 0.53
Vps33bP59016 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC18.36■□□□□ 0.53
Vps33bP59016 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC18.36■□□□□ 0.53
Vps33bP59016 Gm27514-201ENSMUST00000183692 110 ntBASIC18.36■□□□□ 0.53
Vps33bP59016 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC18.36■□□□□ 0.53
Vps33bP59016 Gm44608-201ENSMUST00000206827 855 ntBASIC18.36■□□□□ 0.53
Vps33bP59016 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC18.36■□□□□ 0.53
Vps33bP59016 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Vps33bP59016 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps33bP59016 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC18.36■□□□□ 0.53
Vps33bP59016 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps33bP59016 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps33bP59016 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Vps33bP59016 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps33bP59016 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps33bP59016 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps33bP59016 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps33bP59016 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps33bP59016 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps33bP59016 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps33bP59016 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps33bP59016 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC18.35■□□□□ 0.53
Vps33bP59016 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vps33bP59016 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps33bP59016 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.35■□□□□ 0.53
Vps33bP59016 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC18.35■□□□□ 0.53
Vps33bP59016 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vps33bP59016 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.35■□□□□ 0.53
Vps33bP59016 Gm38037-201ENSMUST00000192600 1624 ntBASIC18.35■□□□□ 0.53
Vps33bP59016 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps33bP59016 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps33bP59016 Gm7553-201ENSMUST00000185805 1426 ntBASIC18.35■□□□□ 0.53
Vps33bP59016 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Vps33bP59016 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps33bP59016 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps33bP59016 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
Vps33bP59016 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Vps33bP59016 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vps33bP59016 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC18.35■□□□□ 0.53
Vps33bP59016 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC18.35■□□□□ 0.53
Vps33bP59016 Gm8801-201ENSMUST00000173255 1064 ntBASIC18.35■□□□□ 0.53
Vps33bP59016 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC18.35■□□□□ 0.53
Vps33bP59016 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC18.35■□□□□ 0.53
Vps33bP59016 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC18.35■□□□□ 0.53
Vps33bP59016 AC122459.1-201ENSMUST00000228373 885 ntBASIC18.35■□□□□ 0.53
Vps33bP59016 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Vps33bP59016 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Vps33bP59016 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps33bP59016 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps33bP59016 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Vps33bP59016 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Vps33bP59016 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps33bP59016 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Vps33bP59016 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps33bP59016 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps33bP59016 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps33bP59016 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps33bP59016 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Vps33bP59016 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vps33bP59016 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps33bP59016 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps33bP59016 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Vps33bP59016 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vps33bP59016 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps33bP59016 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Vps33bP59016 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vps33bP59016 Gm5940-201ENSMUST00000117582 1068 ntBASIC18.34■□□□□ 0.53
Vps33bP59016 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vps33bP59016 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC18.34■□□□□ 0.53
Vps33bP59016 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps33bP59016 Ighv8-14-201ENSMUST00000196781 358 ntBASIC18.34■□□□□ 0.53
Vps33bP59016 Gm7172-201ENSMUST00000218047 1152 ntBASIC18.34■□□□□ 0.53
Vps33bP59016 Gm7399-201ENSMUST00000032395 858 ntBASIC18.34■□□□□ 0.53
Vps33bP59016 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC18.34■□□□□ 0.53
Vps33bP59016 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Vps33bP59016 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Vps33bP59016 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps33bP59016 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps33bP59016 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps33bP59016 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vps33bP59016 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps33bP59016 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps33bP59016 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Vps33bP59016 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Vps33bP59016 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vps33bP59016 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vps33bP59016 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vps33bP59016 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Vps33bP59016 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC18.33■□□□□ 0.52
Vps33bP59016 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC18.33■□□□□ 0.52
Vps33bP59016 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps33bP59016 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC18.33■□□□□ 0.52
Vps33bP59016 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Vps33bP59016 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps33bP59016 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps33bP59016 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Vps33bP59016 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps33bP59016 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms