Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Sox18P43680 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Sox18P43680 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox18P43680 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.12□□□□□ -0.15
Sox18P43680 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sox18P43680 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox18P43680 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox18P43680 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sox18P43680 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox18P43680 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox18P43680 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox18P43680 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox18P43680 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox18P43680 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox18P43680 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox18P43680 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox18P43680 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox18P43680 Gm5566-201ENSMUST00000116118 459 ntBASIC14.11□□□□□ -0.15
Sox18P43680 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.11□□□□□ -0.15
Sox18P43680 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.11□□□□□ -0.15
Sox18P43680 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox18P43680 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC14.11□□□□□ -0.15
Sox18P43680 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Sox18P43680 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.11□□□□□ -0.15
Sox18P43680 AC159246.1-201ENSMUST00000214478 249 ntBASIC14.11□□□□□ -0.15
Sox18P43680 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox18P43680 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox18P43680 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox18P43680 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox18P43680 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox18P43680 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox18P43680 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox18P43680 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox18P43680 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox18P43680 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox18P43680 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox18P43680 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sox18P43680 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Sox18P43680 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox18P43680 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox18P43680 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox18P43680 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox18P43680 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox18P43680 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox18P43680 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.1□□□□□ -0.15
Sox18P43680 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox18P43680 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox18P43680 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox18P43680 Gm15806-201ENSMUST00000120696 955 ntBASIC14.1□□□□□ -0.15
Sox18P43680 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox18P43680 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.1□□□□□ -0.15
Sox18P43680 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox18P43680 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.1□□□□□ -0.15
Sox18P43680 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox18P43680 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.1□□□□□ -0.15
Sox18P43680 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
Sox18P43680 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.1□□□□□ -0.15
Sox18P43680 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox18P43680 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Sox18P43680 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox18P43680 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox18P43680 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox18P43680 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox18P43680 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox18P43680 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox18P43680 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox18P43680 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox18P43680 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sox18P43680 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sox18P43680 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox18P43680 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.09□□□□□ -0.15
Sox18P43680 Sybu-209ENSMUST00000228639 4113 ntBASIC14.09□□□□□ -0.15
Sox18P43680 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox18P43680 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox18P43680 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox18P43680 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.09□□□□□ -0.15
Sox18P43680 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox18P43680 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Sox18P43680 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox18P43680 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox18P43680 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox18P43680 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox18P43680 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox18P43680 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.09□□□□□ -0.15
Sox18P43680 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox18P43680 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox18P43680 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox18P43680 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.09□□□□□ -0.15
Sox18P43680 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox18P43680 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.09□□□□□ -0.15
Sox18P43680 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox18P43680 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Sox18P43680 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Sox18P43680 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox18P43680 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox18P43680 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox18P43680 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox18P43680 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.09□□□□□ -0.15
Sox18P43680 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.09□□□□□ -0.15
Sox18P43680 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms