Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.62□□□□□ -0.23
Thbs1P35441 Gm13597-201ENSMUST00000121239 375 ntBASIC13.62□□□□□ -0.23
Thbs1P35441 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.62□□□□□ -0.23
Thbs1P35441 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Thbs1P35441 Gm9726-201ENSMUST00000180321 678 ntBASIC13.62□□□□□ -0.23
Thbs1P35441 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.62□□□□□ -0.23
Thbs1P35441 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Thbs1P35441 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.62□□□□□ -0.23
Thbs1P35441 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.62□□□□□ -0.23
Thbs1P35441 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.62□□□□□ -0.23
Thbs1P35441 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thbs1P35441 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thbs1P35441 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.62□□□□□ -0.23
Thbs1P35441 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.62□□□□□ -0.23
Thbs1P35441 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thbs1P35441 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.62□□□□□ -0.23
Thbs1P35441 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thbs1P35441 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thbs1P35441 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Thbs1P35441 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thbs1P35441 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thbs1P35441 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.62□□□□□ -0.23
Thbs1P35441 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thbs1P35441 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thbs1P35441 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thbs1P35441 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thbs1P35441 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Thbs1P35441 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thbs1P35441 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Thbs1P35441 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thbs1P35441 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thbs1P35441 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thbs1P35441 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thbs1P35441 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thbs1P35441 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Thbs1P35441 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.61□□□□□ -0.23
Thbs1P35441 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thbs1P35441 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thbs1P35441 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thbs1P35441 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thbs1P35441 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thbs1P35441 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
Thbs1P35441 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thbs1P35441 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thbs1P35441 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Thbs1P35441 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Thbs1P35441 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Thbs1P35441 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thbs1P35441 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Thbs1P35441 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.61□□□□□ -0.23
Thbs1P35441 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.61□□□□□ -0.23
Thbs1P35441 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thbs1P35441 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thbs1P35441 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Thbs1P35441 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.61□□□□□ -0.23
Thbs1P35441 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thbs1P35441 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Thbs1P35441 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thbs1P35441 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thbs1P35441 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thbs1P35441 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.61□□□□□ -0.23
Thbs1P35441 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.61□□□□□ -0.23
Thbs1P35441 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Thbs1P35441 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.6□□□□□ -0.23
Thbs1P35441 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thbs1P35441 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thbs1P35441 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thbs1P35441 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Thbs1P35441 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Thbs1P35441 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thbs1P35441 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thbs1P35441 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thbs1P35441 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thbs1P35441 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thbs1P35441 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Thbs1P35441 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Thbs1P35441 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thbs1P35441 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Thbs1P35441 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.6□□□□□ -0.23
Thbs1P35441 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thbs1P35441 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.6□□□□□ -0.23
Thbs1P35441 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.6□□□□□ -0.23
Thbs1P35441 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thbs1P35441 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC13.6□□□□□ -0.23
Thbs1P35441 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thbs1P35441 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.6□□□□□ -0.23
Thbs1P35441 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thbs1P35441 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thbs1P35441 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.6□□□□□ -0.23
Thbs1P35441 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Thbs1P35441 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thbs1P35441 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thbs1P35441 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.6□□□□□ -0.23
Thbs1P35441 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thbs1P35441 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Thbs1P35441 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thbs1P35441 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.6□□□□□ -0.23
Thbs1P35441 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thbs1P35441 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Thbs1P35441 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms