Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Col8a2P25318 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col8a2P25318 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col8a2P25318 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col8a2P25318 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col8a2P25318 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col8a2P25318 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col8a2P25318 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Col8a2P25318 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.29□□□□□ -0.44
Col8a2P25318 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col8a2P25318 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Col8a2P25318 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col8a2P25318 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Col8a2P25318 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col8a2P25318 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Col8a2P25318 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col8a2P25318 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Col8a2P25318 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.29□□□□□ -0.44
Col8a2P25318 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.29□□□□□ -0.44
Col8a2P25318 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.29□□□□□ -0.44
Col8a2P25318 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col8a2P25318 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.29□□□□□ -0.44
Col8a2P25318 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.29□□□□□ -0.44
Col8a2P25318 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.29□□□□□ -0.44
Col8a2P25318 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Col8a2P25318 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col8a2P25318 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col8a2P25318 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col8a2P25318 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.29□□□□□ -0.44
Col8a2P25318 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col8a2P25318 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col8a2P25318 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col8a2P25318 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col8a2P25318 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Col8a2P25318 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col8a2P25318 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col8a2P25318 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col8a2P25318 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.29□□□□□ -0.44
Col8a2P25318 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col8a2P25318 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Col8a2P25318 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col8a2P25318 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col8a2P25318 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col8a2P25318 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Col8a2P25318 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col8a2P25318 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col8a2P25318 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.28□□□□□ -0.44
Col8a2P25318 Gm22065-201ENSMUST00000103753 110 ntBASIC12.28□□□□□ -0.44
Col8a2P25318 Gm22066-201ENSMUST00000103761 110 ntBASIC12.28□□□□□ -0.44
Col8a2P25318 Gm24932-201ENSMUST00000103763 110 ntBASIC12.28□□□□□ -0.44
Col8a2P25318 Gm24115-201ENSMUST00000103799 110 ntBASIC12.28□□□□□ -0.44
Col8a2P25318 Gm22190-201ENSMUST00000103827 110 ntBASIC12.28□□□□□ -0.44
Col8a2P25318 Gm22191-201ENSMUST00000103831 110 ntBASIC12.28□□□□□ -0.44
Col8a2P25318 Gm24721-201ENSMUST00000103849 110 ntBASIC12.28□□□□□ -0.44
Col8a2P25318 Gm28018-201ENSMUST00000103869 110 ntBASIC12.28□□□□□ -0.44
Col8a2P25318 Gm26399-201ENSMUST00000103937 110 ntBASIC12.28□□□□□ -0.44
Col8a2P25318 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col8a2P25318 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col8a2P25318 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col8a2P25318 Gm2810-201ENSMUST00000118681 990 ntBASIC12.28□□□□□ -0.44
Col8a2P25318 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Col8a2P25318 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.28□□□□□ -0.44
Col8a2P25318 Gm22175-201ENSMUST00000175007 78 ntBASIC12.28□□□□□ -0.44
Col8a2P25318 Gm25349-201ENSMUST00000177728 110 ntBASIC12.28□□□□□ -0.44
Col8a2P25318 Gm23616-201ENSMUST00000177797 110 ntBASIC12.28□□□□□ -0.44
Col8a2P25318 Gm25871-201ENSMUST00000177816 110 ntBASIC12.28□□□□□ -0.44
Col8a2P25318 Gm24752-201ENSMUST00000178240 110 ntBASIC12.28□□□□□ -0.44
Col8a2P25318 Gm24496-201ENSMUST00000178287 110 ntBASIC12.28□□□□□ -0.44
Col8a2P25318 Gm25649-201ENSMUST00000178476 110 ntBASIC12.28□□□□□ -0.44
Col8a2P25318 Gm25548-201ENSMUST00000178681 110 ntBASIC12.28□□□□□ -0.44
Col8a2P25318 Gm23147-201ENSMUST00000178841 110 ntBASIC12.28□□□□□ -0.44
Col8a2P25318 Gm26095-201ENSMUST00000179270 110 ntBASIC12.28□□□□□ -0.44
Col8a2P25318 Gm22171-201ENSMUST00000179283 110 ntBASIC12.28□□□□□ -0.44
Col8a2P25318 Gm23936-201ENSMUST00000179354 110 ntBASIC12.28□□□□□ -0.44
Col8a2P25318 Gm22619-201ENSMUST00000179516 110 ntBASIC12.28□□□□□ -0.44
Col8a2P25318 Gm25255-201ENSMUST00000179579 110 ntBASIC12.28□□□□□ -0.44
Col8a2P25318 Gm24755-201ENSMUST00000179691 110 ntBASIC12.28□□□□□ -0.44
Col8a2P25318 Gm26506-201ENSMUST00000179692 110 ntBASIC12.28□□□□□ -0.44
Col8a2P25318 Gm25086-201ENSMUST00000179931 110 ntBASIC12.28□□□□□ -0.44
Col8a2P25318 Gm23243-201ENSMUST00000180047 110 ntBASIC12.28□□□□□ -0.44
Col8a2P25318 Gm24659-201ENSMUST00000180212 110 ntBASIC12.28□□□□□ -0.44
Col8a2P25318 Gm24169-201ENSMUST00000180244 110 ntBASIC12.28□□□□□ -0.44
Col8a2P25318 Gm23689-201ENSMUST00000180354 110 ntBASIC12.28□□□□□ -0.44
Col8a2P25318 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col8a2P25318 Gm27359-201ENSMUST00000184153 110 ntBASIC12.28□□□□□ -0.44
Col8a2P25318 Gm27785-201ENSMUST00000184268 110 ntBASIC12.28□□□□□ -0.44
Col8a2P25318 Gm27466-201ENSMUST00000184396 110 ntBASIC12.28□□□□□ -0.44
Col8a2P25318 Gm27703-201ENSMUST00000184836 110 ntBASIC12.28□□□□□ -0.44
Col8a2P25318 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.28□□□□□ -0.44
Col8a2P25318 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col8a2P25318 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.28□□□□□ -0.44
Col8a2P25318 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col8a2P25318 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.28□□□□□ -0.44
Col8a2P25318 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Col8a2P25318 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Col8a2P25318 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col8a2P25318 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Col8a2P25318 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col8a2P25318 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col8a2P25318 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms