Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Tnfrsf1bP25119 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Tnfrsf1bP25119 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Tnfrsf1bP25119 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf1bP25119 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf1bP25119 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf1bP25119 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf1bP25119 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.64□□□□□ -0.23
Tnfrsf1bP25119 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf1bP25119 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf1bP25119 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf1bP25119 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf1bP25119 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf1bP25119 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf1bP25119 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf1bP25119 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf1bP25119 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Tnfrsf1bP25119 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Tnfrsf1bP25119 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf1bP25119 Gm6973-201ENSMUST00000117080 721 ntBASIC13.64□□□□□ -0.23
Tnfrsf1bP25119 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.64□□□□□ -0.23
Tnfrsf1bP25119 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.64□□□□□ -0.23
Tnfrsf1bP25119 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.64□□□□□ -0.23
Tnfrsf1bP25119 Gm15483-201ENSMUST00000120338 456 ntBASIC13.64□□□□□ -0.23
Tnfrsf1bP25119 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.64□□□□□ -0.23
Tnfrsf1bP25119 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.64□□□□□ -0.23
Tnfrsf1bP25119 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Tnfrsf1bP25119 Gm43575-201ENSMUST00000196420 516 ntBASIC13.64□□□□□ -0.23
Tnfrsf1bP25119 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf1bP25119 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf1bP25119 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf1bP25119 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf1bP25119 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Tnfrsf1bP25119 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf1bP25119 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf1bP25119 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf1bP25119 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 Rprl2-201ENSMUST00000157150 290 ntBASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf1bP25119 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.62□□□□□ -0.23
Tnfrsf1bP25119 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Tnfrsf1bP25119 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1bP25119 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1bP25119 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1bP25119 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.62□□□□□ -0.23
Tnfrsf1bP25119 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1bP25119 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1bP25119 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1bP25119 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1bP25119 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1bP25119 Gm13464-201ENSMUST00000119418 935 ntBASIC13.62□□□□□ -0.23
Tnfrsf1bP25119 Gm11543-201ENSMUST00000120758 370 ntBASIC13.62□□□□□ -0.23
Tnfrsf1bP25119 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.62□□□□□ -0.23
Tnfrsf1bP25119 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.62□□□□□ -0.23
Tnfrsf1bP25119 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1bP25119 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1bP25119 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1bP25119 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1bP25119 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1bP25119 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1bP25119 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Tnfrsf1bP25119 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.62□□□□□ -0.23
Tnfrsf1bP25119 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms