Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cbx3P23198 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cbx3P23198 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cbx3P23198 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cbx3P23198 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Cbx3P23198 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cbx3P23198 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
Cbx3P23198 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cbx3P23198 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.44□□□□□ -0.26
Cbx3P23198 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.44□□□□□ -0.26
Cbx3P23198 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.44□□□□□ -0.26
Cbx3P23198 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Cbx3P23198 Gm27011-201ENSMUST00000182352 972 ntBASIC13.44□□□□□ -0.26
Cbx3P23198 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.44□□□□□ -0.26
Cbx3P23198 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Cbx3P23198 AC112142.1-201ENSMUST00000228796 918 ntBASIC13.44□□□□□ -0.26
Cbx3P23198 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cbx3P23198 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cbx3P23198 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.44□□□□□ -0.26
Cbx3P23198 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cbx3P23198 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cbx3P23198 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.44□□□□□ -0.26
Cbx3P23198 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cbx3P23198 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cbx3P23198 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cbx3P23198 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cbx3P23198 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cbx3P23198 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
Cbx3P23198 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Cbx3P23198 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cbx3P23198 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cbx3P23198 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Cbx3P23198 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cbx3P23198 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cbx3P23198 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cbx3P23198 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cbx3P23198 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cbx3P23198 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cbx3P23198 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Cbx3P23198 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Cbx3P23198 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cbx3P23198 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cbx3P23198 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cbx3P23198 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cbx3P23198 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cbx3P23198 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Cbx3P23198 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cbx3P23198 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Cbx3P23198 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cbx3P23198 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cbx3P23198 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cbx3P23198 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.43□□□□□ -0.26
Cbx3P23198 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cbx3P23198 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cbx3P23198 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cbx3P23198 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.43□□□□□ -0.26
Cbx3P23198 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cbx3P23198 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Cbx3P23198 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.43□□□□□ -0.26
Cbx3P23198 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cbx3P23198 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cbx3P23198 Gm45053-201ENSMUST00000206112 2499 ntBASIC13.43□□□□□ -0.26
Cbx3P23198 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
Cbx3P23198 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cbx3P23198 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cbx3P23198 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cbx3P23198 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cbx3P23198 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cbx3P23198 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cbx3P23198 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cbx3P23198 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cbx3P23198 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cbx3P23198 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cbx3P23198 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cbx3P23198 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.43□□□□□ -0.26
Cbx3P23198 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.43□□□□□ -0.26
Cbx3P23198 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cbx3P23198 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cbx3P23198 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cbx3P23198 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Cbx3P23198 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cbx3P23198 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cbx3P23198 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cbx3P23198 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cbx3P23198 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cbx3P23198 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cbx3P23198 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cbx3P23198 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Cbx3P23198 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cbx3P23198 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cbx3P23198 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cbx3P23198 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Cbx3P23198 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Cbx3P23198 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cbx3P23198 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Cbx3P23198 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.42□□□□□ -0.26
Cbx3P23198 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Cbx3P23198 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cbx3P23198 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Cbx3P23198 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms