Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fv4P11370 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.25□□□□□ -0.13
Fv4P11370 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Fv4P11370 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fv4P11370 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Fv4P11370 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Fv4P11370 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fv4P11370 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Fv4P11370 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Fv4P11370 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fv4P11370 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Fv4P11370 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Fv4P11370 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Fv4P11370 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Fv4P11370 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fv4P11370 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Fv4P11370 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fv4P11370 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fv4P11370 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fv4P11370 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Fv4P11370 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fv4P11370 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fv4P11370 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.24□□□□□ -0.13
Fv4P11370 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fv4P11370 Gm13464-201ENSMUST00000119418 935 ntBASIC14.24□□□□□ -0.13
Fv4P11370 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Fv4P11370 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Fv4P11370 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Fv4P11370 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.24□□□□□ -0.13
Fv4P11370 Gm9726-201ENSMUST00000180321 678 ntBASIC14.24□□□□□ -0.13
Fv4P11370 Gm27300-201ENSMUST00000184085 97 ntBASIC14.24□□□□□ -0.13
Fv4P11370 Gm27335-201ENSMUST00000184758 97 ntBASIC14.24□□□□□ -0.13
Fv4P11370 Gm28659-201ENSMUST00000188013 759 ntBASIC14.24□□□□□ -0.13
Fv4P11370 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.24□□□□□ -0.13
Fv4P11370 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.24□□□□□ -0.13
Fv4P11370 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fv4P11370 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fv4P11370 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fv4P11370 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.24□□□□□ -0.13
Fv4P11370 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Fv4P11370 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC14.24□□□□□ -0.13
Fv4P11370 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fv4P11370 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fv4P11370 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Fv4P11370 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fv4P11370 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Fv4P11370 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.24□□□□□ -0.13
Fv4P11370 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Fv4P11370 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Fv4P11370 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.24□□□□□ -0.13
Fv4P11370 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Fv4P11370 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fv4P11370 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Fv4P11370 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fv4P11370 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fv4P11370 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fv4P11370 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Fv4P11370 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Fv4P11370 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Fv4P11370 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fv4P11370 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Fv4P11370 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Fv4P11370 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fv4P11370 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.23□□□□□ -0.13
Fv4P11370 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Fv4P11370 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fv4P11370 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fv4P11370 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fv4P11370 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fv4P11370 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fv4P11370 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.23□□□□□ -0.13
Fv4P11370 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.23□□□□□ -0.13
Fv4P11370 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.23□□□□□ -0.13
Fv4P11370 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fv4P11370 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Fv4P11370 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Fv4P11370 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.23□□□□□ -0.13
Fv4P11370 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Fv4P11370 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Fv4P11370 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fv4P11370 Gm15590-201ENSMUST00000078419 552 ntBASIC14.23□□□□□ -0.13
Fv4P11370 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.23□□□□□ -0.13
Fv4P11370 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fv4P11370 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Fv4P11370 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fv4P11370 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fv4P11370 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fv4P11370 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Fv4P11370 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fv4P11370 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Fv4P11370 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fv4P11370 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fv4P11370 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Fv4P11370 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Fv4P11370 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.22□□□□□ -0.13
Fv4P11370 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fv4P11370 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Fv4P11370 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Fv4P11370 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Fv4P11370 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms