Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
PtcraP0C6B2 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
PtcraP0C6B2 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.79□□□□□ -0.36
PtcraP0C6B2 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.79□□□□□ -0.36
PtcraP0C6B2 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.79□□□□□ -0.36
PtcraP0C6B2 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.79□□□□□ -0.36
PtcraP0C6B2 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
PtcraP0C6B2 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.79□□□□□ -0.36
PtcraP0C6B2 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
PtcraP0C6B2 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PtcraP0C6B2 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.78□□□□□ -0.36
PtcraP0C6B2 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
PtcraP0C6B2 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PtcraP0C6B2 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PtcraP0C6B2 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
PtcraP0C6B2 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PtcraP0C6B2 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
PtcraP0C6B2 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PtcraP0C6B2 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PtcraP0C6B2 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PtcraP0C6B2 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PtcraP0C6B2 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PtcraP0C6B2 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PtcraP0C6B2 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PtcraP0C6B2 Gm11025-201ENSMUST00000140773 466 ntBASIC12.78□□□□□ -0.36
PtcraP0C6B2 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.78□□□□□ -0.36
PtcraP0C6B2 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
PtcraP0C6B2 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
PtcraP0C6B2 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.78□□□□□ -0.36
PtcraP0C6B2 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.78□□□□□ -0.36
PtcraP0C6B2 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
PtcraP0C6B2 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PtcraP0C6B2 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
PtcraP0C6B2 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PtcraP0C6B2 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.78□□□□□ -0.36
PtcraP0C6B2 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PtcraP0C6B2 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
PtcraP0C6B2 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PtcraP0C6B2 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PtcraP0C6B2 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.78□□□□□ -0.36
PtcraP0C6B2 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
PtcraP0C6B2 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PtcraP0C6B2 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PtcraP0C6B2 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PtcraP0C6B2 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
PtcraP0C6B2 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
PtcraP0C6B2 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
PtcraP0C6B2 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.36
PtcraP0C6B2 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
PtcraP0C6B2 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
PtcraP0C6B2 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
PtcraP0C6B2 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
PtcraP0C6B2 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
PtcraP0C6B2 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
PtcraP0C6B2 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
PtcraP0C6B2 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.77□□□□□ -0.37
PtcraP0C6B2 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
PtcraP0C6B2 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.77□□□□□ -0.37
PtcraP0C6B2 Gm12134-201ENSMUST00000122109 520 ntBASIC12.77□□□□□ -0.37
PtcraP0C6B2 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
PtcraP0C6B2 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms