Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Gm30437-201ENSMUST00000206086 1201 ntBASIC21.83■■□□□ 1.09
NclP09405 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NclP09405 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NclP09405 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NclP09405 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NclP09405 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
NclP09405 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
NclP09405 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
NclP09405 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
NclP09405 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
NclP09405 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
NclP09405 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC21.83■■□□□ 1.08
NclP09405 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
NclP09405 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
NclP09405 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.08
NclP09405 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
NclP09405 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
NclP09405 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
NclP09405 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
NclP09405 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NclP09405 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NclP09405 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
NclP09405 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NclP09405 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NclP09405 Trav13-3-201ENSMUST00000117226 336 ntBASIC21.82■■□□□ 1.08
NclP09405 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC21.82■■□□□ 1.08
NclP09405 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC21.82■■□□□ 1.08
NclP09405 Gm27306-201ENSMUST00000183970 107 ntBASIC21.82■■□□□ 1.08
NclP09405 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NclP09405 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC21.82■■□□□ 1.08
NclP09405 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
NclP09405 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC21.82■■□□□ 1.08
NclP09405 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NclP09405 Gm43352-201ENSMUST00000196419 3065 ntBASIC21.82■■□□□ 1.08
NclP09405 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
NclP09405 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NclP09405 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NclP09405 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
NclP09405 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
NclP09405 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NclP09405 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NclP09405 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NclP09405 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NclP09405 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
NclP09405 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NclP09405 Gm6756-201ENSMUST00000180647 1620 ntBASIC21.81■■□□□ 1.08
NclP09405 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
NclP09405 Gm13453-201ENSMUST00000118708 357 ntBASIC21.81■■□□□ 1.08
NclP09405 Gm27321-201ENSMUST00000185021 205 ntBASIC21.81■■□□□ 1.08
NclP09405 Gm38294-201ENSMUST00000192831 381 ntBASIC21.81■■□□□ 1.08
NclP09405 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NclP09405 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC21.81■■□□□ 1.08
NclP09405 Rbfox2-208ENSMUST00000227930 1218 ntBASIC21.81■■□□□ 1.08
NclP09405 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
NclP09405 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
NclP09405 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NclP09405 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NclP09405 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
NclP09405 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NclP09405 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NclP09405 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NclP09405 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
NclP09405 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NclP09405 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NclP09405 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC21.8■■□□□ 1.08
NclP09405 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NclP09405 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NclP09405 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
NclP09405 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NclP09405 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NclP09405 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NclP09405 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
NclP09405 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NclP09405 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NclP09405 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC21.8■■□□□ 1.08
NclP09405 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NclP09405 Gm45098-201ENSMUST00000207179 657 ntBASIC21.8■■□□□ 1.08
NclP09405 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NclP09405 Gm6888-201ENSMUST00000221983 706 ntBASIC21.8■■□□□ 1.08
NclP09405 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NclP09405 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
NclP09405 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NclP09405 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NclP09405 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NclP09405 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
NclP09405 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NclP09405 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NclP09405 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NclP09405 Gm44443-201ENSMUST00000204396 5633 ntBASIC21.8■■□□□ 1.08
NclP09405 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NclP09405 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NclP09405 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
NclP09405 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NclP09405 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NclP09405 Tcf21-202ENSMUST00000218002 1788 ntBASIC21.79■■□□□ 1.08
NclP09405 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NclP09405 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NclP09405 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NclP09405 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NclP09405 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms