Protein–RNA interactions for Protein: P09084

Pax1, Paired box protein Pax-1, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pax1P09084 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pax1P09084 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.01□□□□□ -0.49
Pax1P09084 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pax1P09084 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pax1P09084 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Pax1P09084 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pax1P09084 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pax1P09084 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pax1P09084 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12□□□□□ -0.49
Pax1P09084 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pax1P09084 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pax1P09084 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Pax1P09084 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12□□□□□ -0.49
Pax1P09084 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12□□□□□ -0.49
Pax1P09084 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pax1P09084 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC12□□□□□ -0.49
Pax1P09084 Gm22885-201ENSMUST00000157410 107 ntBASIC12□□□□□ -0.49
Pax1P09084 Gm27867-201ENSMUST00000184778 125 ntBASIC12□□□□□ -0.49
Pax1P09084 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC12□□□□□ -0.49
Pax1P09084 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12□□□□□ -0.49
Pax1P09084 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pax1P09084 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC12□□□□□ -0.49
Pax1P09084 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pax1P09084 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pax1P09084 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pax1P09084 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Pax1P09084 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pax1P09084 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Pax1P09084 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pax1P09084 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12□□□□□ -0.49
Pax1P09084 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pax1P09084 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12□□□□□ -0.49
Pax1P09084 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pax1P09084 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pax1P09084 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pax1P09084 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pax1P09084 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pax1P09084 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Pax1P09084 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12□□□□□ -0.49
Pax1P09084 Gm4081-201ENSMUST00000195287 1838 ntBASIC12□□□□□ -0.49
Pax1P09084 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12□□□□□ -0.49
Pax1P09084 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pax1P09084 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pax1P09084 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pax1P09084 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pax1P09084 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pax1P09084 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pax1P09084 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pax1P09084 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pax1P09084 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pax1P09084 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pax1P09084 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pax1P09084 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pax1P09084 Gm15165-201ENSMUST00000118140 502 ntBASIC11.99□□□□□ -0.49
Pax1P09084 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pax1P09084 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC11.99□□□□□ -0.49
Pax1P09084 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pax1P09084 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pax1P09084 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Pax1P09084 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Pax1P09084 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Pax1P09084 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC11.99□□□□□ -0.49
Pax1P09084 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Pax1P09084 Gm33142-201ENSMUST00000193913 867 ntBASIC11.99□□□□□ -0.49
Pax1P09084 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC11.99□□□□□ -0.49
Pax1P09084 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pax1P09084 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pax1P09084 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pax1P09084 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pax1P09084 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pax1P09084 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pax1P09084 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pax1P09084 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pax1P09084 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pax1P09084 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pax1P09084 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pax1P09084 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pax1P09084 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pax1P09084 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pax1P09084 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pax1P09084 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pax1P09084 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pax1P09084 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pax1P09084 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pax1P09084 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pax1P09084 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.99□□□□□ -0.49
Pax1P09084 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pax1P09084 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.99□□□□□ -0.49
Pax1P09084 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pax1P09084 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pax1P09084 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pax1P09084 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pax1P09084 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Pax1P09084 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pax1P09084 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pax1P09084 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.98□□□□□ -0.49
Pax1P09084 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pax1P09084 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pax1P09084 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pax1P09084 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms