Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC18.82■□□□□ 0.6
Ubr1O70481 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ubr1O70481 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC18.82■□□□□ 0.6
Ubr1O70481 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ubr1O70481 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ubr1O70481 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ubr1O70481 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ubr1O70481 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ubr1O70481 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ubr1O70481 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ubr1O70481 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ubr1O70481 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ubr1O70481 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ubr1O70481 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ubr1O70481 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ubr1O70481 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ubr1O70481 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ubr1O70481 Gm26464-201ENSMUST00000157094 305 ntBASIC18.81■□□□□ 0.6
Ubr1O70481 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ubr1O70481 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ubr1O70481 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ubr1O70481 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ubr1O70481 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ubr1O70481 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ubr1O70481 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ubr1O70481 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ubr1O70481 Gm15376-201ENSMUST00000122258 783 ntBASIC18.81■□□□□ 0.6
Ubr1O70481 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ubr1O70481 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ubr1O70481 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ubr1O70481 Gm37714-201ENSMUST00000194742 342 ntBASIC18.81■□□□□ 0.6
Ubr1O70481 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC18.81■□□□□ 0.6
Ubr1O70481 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ubr1O70481 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ubr1O70481 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ubr1O70481 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ubr1O70481 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ubr1O70481 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ubr1O70481 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ubr1O70481 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ubr1O70481 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC18.8■□□□□ 0.6
Ubr1O70481 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ubr1O70481 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ubr1O70481 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ubr1O70481 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ubr1O70481 Gm11524-201ENSMUST00000119349 807 ntBASIC18.79■□□□□ 0.6
Ubr1O70481 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC18.79■□□□□ 0.6
Ubr1O70481 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Ubr1O70481 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ubr1O70481 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC18.79■□□□□ 0.6
Ubr1O70481 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC18.79■□□□□ 0.6
Ubr1O70481 AY702102-202ENSMUST00000194651 1173 ntBASIC18.79■□□□□ 0.6
Ubr1O70481 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ubr1O70481 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ubr1O70481 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC18.79■□□□□ 0.6
Ubr1O70481 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ubr1O70481 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ubr1O70481 Gm14451-201ENSMUST00000121581 1542 ntBASIC18.79■□□□□ 0.6
Ubr1O70481 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ubr1O70481 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ubr1O70481 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ubr1O70481 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ubr1O70481 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ubr1O70481 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC18.78■□□□□ 0.6
Ubr1O70481 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ubr1O70481 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ubr1O70481 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ubr1O70481 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ubr1O70481 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC18.78■□□□□ 0.6
Ubr1O70481 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Ubr1O70481 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ubr1O70481 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ubr1O70481 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ubr1O70481 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ubr1O70481 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC18.78■□□□□ 0.6
Ubr1O70481 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ubr1O70481 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Ubr1O70481 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC18.78■□□□□ 0.6
Ubr1O70481 Gm28911-201ENSMUST00000188837 117 ntBASIC18.78■□□□□ 0.6
Ubr1O70481 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Ubr1O70481 Gm18062-201ENSMUST00000208020 547 ntBASIC18.78■□□□□ 0.6
Ubr1O70481 Gm18055-201ENSMUST00000208254 547 ntBASIC18.78■□□□□ 0.6
Ubr1O70481 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ubr1O70481 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ubr1O70481 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Ubr1O70481 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ubr1O70481 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ubr1O70481 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ubr1O70481 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ubr1O70481 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ubr1O70481 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Ubr1O70481 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ubr1O70481 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Ubr1O70481 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Ubr1O70481 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ubr1O70481 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ubr1O70481 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ubr1O70481 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ubr1O70481 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC18.77■□□□□ 0.6
Ubr1O70481 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms