Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.18□□□□□ -0.14
Cacna1bO55017 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1bO55017 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1bO55017 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1bO55017 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Cacna1bO55017 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Cacna1bO55017 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1bO55017 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.18□□□□□ -0.14
Cacna1bO55017 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cacna1bO55017 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1bO55017 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1bO55017 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1bO55017 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1bO55017 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1bO55017 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1bO55017 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1bO55017 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1bO55017 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.17□□□□□ -0.14
Cacna1bO55017 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1bO55017 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.17□□□□□ -0.14
Cacna1bO55017 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1bO55017 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Cacna1bO55017 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1bO55017 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1bO55017 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1bO55017 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1bO55017 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1bO55017 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1bO55017 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1bO55017 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Cacna1bO55017 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1bO55017 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1bO55017 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1bO55017 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1bO55017 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cacna1bO55017 Gm12091-201ENSMUST00000146791 830 ntBASIC14.16□□□□□ -0.14
Cacna1bO55017 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.16□□□□□ -0.14
Cacna1bO55017 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.16□□□□□ -0.14
Cacna1bO55017 AA619741-201ENSMUST00000195095 646 ntBASIC14.16□□□□□ -0.14
Cacna1bO55017 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1bO55017 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1bO55017 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1bO55017 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cacna1bO55017 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1bO55017 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1bO55017 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cacna1bO55017 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1bO55017 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1bO55017 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1bO55017 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1bO55017 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1bO55017 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1bO55017 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1bO55017 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.16□□□□□ -0.14
Cacna1bO55017 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1bO55017 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1bO55017 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cacna1bO55017 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cacna1bO55017 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.16□□□□□ -0.14
Cacna1bO55017 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1bO55017 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1bO55017 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1bO55017 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cacna1bO55017 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1bO55017 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1bO55017 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1bO55017 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1bO55017 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.16□□□□□ -0.14
Cacna1bO55017 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1bO55017 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1bO55017 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cacna1bO55017 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1bO55017 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1bO55017 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.15□□□□□ -0.14
Cacna1bO55017 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1bO55017 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.15□□□□□ -0.14
Cacna1bO55017 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.15□□□□□ -0.14
Cacna1bO55017 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.15□□□□□ -0.14
Cacna1bO55017 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.15□□□□□ -0.14
Cacna1bO55017 Gm27631-201ENSMUST00000184163 466 ntBASIC14.15□□□□□ -0.14
Cacna1bO55017 Mir6392-201ENSMUST00000184924 108 ntBASIC14.15□□□□□ -0.14
Cacna1bO55017 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.15□□□□□ -0.14
Cacna1bO55017 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1bO55017 Gm44799-201ENSMUST00000207639 1202 ntBASIC14.15□□□□□ -0.14
Cacna1bO55017 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1bO55017 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
Cacna1bO55017 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cacna1bO55017 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1bO55017 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1bO55017 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Cacna1bO55017 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1bO55017 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1bO55017 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1bO55017 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1bO55017 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1bO55017 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1bO55017 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.15□□□□□ -0.14
Cacna1bO55017 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1bO55017 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cacna1bO55017 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms