Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf13O54965 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf13O54965 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Rnf13O54965 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf13O54965 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf13O54965 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Rnf13O54965 Gm17807-201ENSMUST00000186869 298 ntBASIC13.37□□□□□ -0.27
Rnf13O54965 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Rnf13O54965 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf13O54965 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.37□□□□□ -0.27
Rnf13O54965 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.37□□□□□ -0.27
Rnf13O54965 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf13O54965 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rnf13O54965 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf13O54965 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf13O54965 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.37□□□□□ -0.27
Rnf13O54965 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf13O54965 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf13O54965 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf13O54965 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf13O54965 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf13O54965 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf13O54965 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.37□□□□□ -0.27
Rnf13O54965 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Rnf13O54965 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf13O54965 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf13O54965 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Rnf13O54965 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf13O54965 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rnf13O54965 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf13O54965 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Rnf13O54965 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Rnf13O54965 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf13O54965 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf13O54965 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf13O54965 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.36□□□□□ -0.27
Rnf13O54965 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rnf13O54965 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf13O54965 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf13O54965 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf13O54965 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Rnf13O54965 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rnf13O54965 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf13O54965 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.36□□□□□ -0.27
Rnf13O54965 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.36□□□□□ -0.27
Rnf13O54965 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf13O54965 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf13O54965 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf13O54965 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf13O54965 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.36□□□□□ -0.27
Rnf13O54965 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf13O54965 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf13O54965 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf13O54965 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Rnf13O54965 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf13O54965 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf13O54965 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf13O54965 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf13O54965 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf13O54965 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rnf13O54965 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.35□□□□□ -0.27
Rnf13O54965 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.35□□□□□ -0.27
Rnf13O54965 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf13O54965 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf13O54965 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.35□□□□□ -0.27
Rnf13O54965 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf13O54965 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.35□□□□□ -0.27
Rnf13O54965 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf13O54965 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf13O54965 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Rnf13O54965 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf13O54965 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf13O54965 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf13O54965 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.35□□□□□ -0.27
Rnf13O54965 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Rnf13O54965 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf13O54965 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf13O54965 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf13O54965 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf13O54965 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.35□□□□□ -0.27
Rnf13O54965 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf13O54965 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf13O54965 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf13O54965 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.35□□□□□ -0.27
Rnf13O54965 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf13O54965 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rnf13O54965 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf13O54965 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf13O54965 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf13O54965 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf13O54965 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf13O54965 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.34□□□□□ -0.27
Rnf13O54965 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC13.34□□□□□ -0.27
Rnf13O54965 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf13O54965 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf13O54965 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf13O54965 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf13O54965 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Rnf13O54965 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC13.34□□□□□ -0.27
Rnf13O54965 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms