Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gfra3O35118 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gfra3O35118 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gfra3O35118 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gfra3O35118 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gfra3O35118 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Gfra3O35118 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gfra3O35118 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gfra3O35118 Gm11543-201ENSMUST00000120758 370 ntBASIC12.75□□□□□ -0.37
Gfra3O35118 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gfra3O35118 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gfra3O35118 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gfra3O35118 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.75□□□□□ -0.37
Gfra3O35118 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.75□□□□□ -0.37
Gfra3O35118 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.75□□□□□ -0.37
Gfra3O35118 AC154849.3-201ENSMUST00000223733 1660 ntBASIC12.75□□□□□ -0.37
Gfra3O35118 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gfra3O35118 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gfra3O35118 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gfra3O35118 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gfra3O35118 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Gfra3O35118 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Gfra3O35118 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.75□□□□□ -0.37
Gfra3O35118 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Gfra3O35118 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gfra3O35118 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gfra3O35118 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gfra3O35118 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gfra3O35118 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gfra3O35118 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gfra3O35118 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gfra3O35118 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gfra3O35118 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gfra3O35118 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gfra3O35118 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Gfra3O35118 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gfra3O35118 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Gfra3O35118 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gfra3O35118 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gfra3O35118 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.74□□□□□ -0.37
Gfra3O35118 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gfra3O35118 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gfra3O35118 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Gfra3O35118 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gfra3O35118 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gfra3O35118 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gfra3O35118 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gfra3O35118 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gfra3O35118 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.74□□□□□ -0.37
Gfra3O35118 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gfra3O35118 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gfra3O35118 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gfra3O35118 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Gfra3O35118 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.74□□□□□ -0.37
Gfra3O35118 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gfra3O35118 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gfra3O35118 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gfra3O35118 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gfra3O35118 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gfra3O35118 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gfra3O35118 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gfra3O35118 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gfra3O35118 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gfra3O35118 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Gfra3O35118 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gfra3O35118 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Gfra3O35118 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gfra3O35118 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gfra3O35118 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gfra3O35118 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Gfra3O35118 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gfra3O35118 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gfra3O35118 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gfra3O35118 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Gfra3O35118 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Gfra3O35118 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.73□□□□□ -0.37
Gfra3O35118 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gfra3O35118 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Gfra3O35118 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.73□□□□□ -0.37
Gfra3O35118 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gfra3O35118 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Gfra3O35118 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gfra3O35118 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gfra3O35118 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Gfra3O35118 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.73□□□□□ -0.37
Gfra3O35118 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.73□□□□□ -0.37
Gfra3O35118 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.73□□□□□ -0.37
Gfra3O35118 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gfra3O35118 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gfra3O35118 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gfra3O35118 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gfra3O35118 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gfra3O35118 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gfra3O35118 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gfra3O35118 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gfra3O35118 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gfra3O35118 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gfra3O35118 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gfra3O35118 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gfra3O35118 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms