Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Gm12134-201ENSMUST00000122109 520 ntBASIC13.06□□□□□ -0.32
Raet1aO08602 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Raet1aO08602 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.06□□□□□ -0.32
Raet1aO08602 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.06□□□□□ -0.32
Raet1aO08602 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Raet1aO08602 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Raet1aO08602 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.06□□□□□ -0.32
Raet1aO08602 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Raet1aO08602 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Raet1aO08602 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Raet1aO08602 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Raet1aO08602 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Raet1aO08602 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Raet1aO08602 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Raet1aO08602 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Raet1aO08602 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.06□□□□□ -0.32
Raet1aO08602 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Raet1aO08602 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Raet1aO08602 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Raet1aO08602 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Raet1aO08602 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Raet1aO08602 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Raet1aO08602 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Raet1aO08602 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Raet1aO08602 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Raet1aO08602 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Raet1aO08602 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Raet1aO08602 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raet1aO08602 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raet1aO08602 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raet1aO08602 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Raet1aO08602 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Raet1aO08602 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raet1aO08602 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Raet1aO08602 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Raet1aO08602 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raet1aO08602 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raet1aO08602 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raet1aO08602 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Raet1aO08602 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Raet1aO08602 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raet1aO08602 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raet1aO08602 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raet1aO08602 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Raet1aO08602 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Raet1aO08602 Gm9727-201ENSMUST00000161387 555 ntBASIC13.05□□□□□ -0.32
Raet1aO08602 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raet1aO08602 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.05□□□□□ -0.32
Raet1aO08602 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Raet1aO08602 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raet1aO08602 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raet1aO08602 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.05□□□□□ -0.32
Raet1aO08602 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raet1aO08602 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raet1aO08602 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Raet1aO08602 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raet1aO08602 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raet1aO08602 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.05□□□□□ -0.32
Raet1aO08602 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.05□□□□□ -0.32
Raet1aO08602 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raet1aO08602 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raet1aO08602 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raet1aO08602 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13.05□□□□□ -0.32
Raet1aO08602 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Raet1aO08602 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Raet1aO08602 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Raet1aO08602 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Raet1aO08602 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Raet1aO08602 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Raet1aO08602 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Raet1aO08602 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Raet1aO08602 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Raet1aO08602 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Raet1aO08602 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Raet1aO08602 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Raet1aO08602 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.04□□□□□ -0.32
Raet1aO08602 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
Raet1aO08602 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Raet1aO08602 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Raet1aO08602 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Raet1aO08602 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Raet1aO08602 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Raet1aO08602 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.04□□□□□ -0.32
Raet1aO08602 Gm13464-201ENSMUST00000119418 935 ntBASIC13.04□□□□□ -0.32
Raet1aO08602 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.04□□□□□ -0.32
Raet1aO08602 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.04□□□□□ -0.32
Raet1aO08602 Gm16026-204ENSMUST00000162652 683 ntBASIC13.04□□□□□ -0.32
Raet1aO08602 Gm27301-201ENSMUST00000184012 127 ntBASIC13.04□□□□□ -0.32
Raet1aO08602 Gm17968-201ENSMUST00000194902 784 ntBASIC13.04□□□□□ -0.32
Raet1aO08602 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Raet1aO08602 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.04□□□□□ -0.32
Raet1aO08602 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Raet1aO08602 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Raet1aO08602 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Raet1aO08602 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Raet1aO08602 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Raet1aO08602 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Raet1aO08602 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Raet1aO08602 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Raet1aO08602 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms