Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc188F6WEU2 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.73□□□□□ -0.05
Ccdc188F6WEU2 Gm9368-201ENSMUST00000219348 831 ntBASIC14.73□□□□□ -0.05
Ccdc188F6WEU2 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc188F6WEU2 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc188F6WEU2 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc188F6WEU2 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.73□□□□□ -0.05
Ccdc188F6WEU2 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.73□□□□□ -0.05
Ccdc188F6WEU2 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc188F6WEU2 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc188F6WEU2 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Ccdc188F6WEU2 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ccdc188F6WEU2 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc188F6WEU2 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc188F6WEU2 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.72□□□□□ -0.05
Ccdc188F6WEU2 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc188F6WEU2 Gm13612-201ENSMUST00000119276 390 ntBASIC14.72□□□□□ -0.05
Ccdc188F6WEU2 Gm11803-201ENSMUST00000119966 444 ntBASIC14.72□□□□□ -0.05
Ccdc188F6WEU2 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc188F6WEU2 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Ccdc188F6WEU2 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.72□□□□□ -0.05
Ccdc188F6WEU2 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC14.72□□□□□ -0.05
Ccdc188F6WEU2 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc188F6WEU2 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc188F6WEU2 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc188F6WEU2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc188F6WEU2 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc188F6WEU2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.72□□□□□ -0.05
Ccdc188F6WEU2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc188F6WEU2 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc188F6WEU2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc188F6WEU2 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Ccdc188F6WEU2 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc188F6WEU2 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc188F6WEU2 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc188F6WEU2 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Ccdc188F6WEU2 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc188F6WEU2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ccdc188F6WEU2 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc188F6WEU2 Gm9333-201ENSMUST00000205452 1323 ntBASIC14.71□□□□□ -0.05
Ccdc188F6WEU2 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.71□□□□□ -0.05
Ccdc188F6WEU2 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc188F6WEU2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc188F6WEU2 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Ccdc188F6WEU2 Gm22323-201ENSMUST00000103832 109 ntBASIC14.71□□□□□ -0.05
Ccdc188F6WEU2 B9d1os-201ENSMUST00000137010 674 ntBASIC14.71□□□□□ -0.05
Ccdc188F6WEU2 Gm22334-201ENSMUST00000158070 133 ntBASIC14.71□□□□□ -0.05
Ccdc188F6WEU2 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc188F6WEU2 Gm37230-201ENSMUST00000194491 818 ntBASIC14.71□□□□□ -0.05
Ccdc188F6WEU2 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.71□□□□□ -0.05
Ccdc188F6WEU2 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.71□□□□□ -0.05
Ccdc188F6WEU2 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc188F6WEU2 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Ccdc188F6WEU2 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc188F6WEU2 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ccdc188F6WEU2 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ccdc188F6WEU2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ccdc188F6WEU2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc188F6WEU2 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc188F6WEU2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc188F6WEU2 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc188F6WEU2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc188F6WEU2 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc188F6WEU2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc188F6WEU2 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc188F6WEU2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc188F6WEU2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Ccdc188F6WEU2 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc188F6WEU2 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc188F6WEU2 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc188F6WEU2 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.7□□□□□ -0.06
Ccdc188F6WEU2 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Ccdc188F6WEU2 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ccdc188F6WEU2 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.7□□□□□ -0.06
Ccdc188F6WEU2 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc188F6WEU2 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc188F6WEU2 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc188F6WEU2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc188F6WEU2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc188F6WEU2 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc188F6WEU2 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.7□□□□□ -0.06
Ccdc188F6WEU2 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ccdc188F6WEU2 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc188F6WEU2 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ccdc188F6WEU2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Ccdc188F6WEU2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc188F6WEU2 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc188F6WEU2 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc188F6WEU2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc188F6WEU2 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Ccdc188F6WEU2 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc188F6WEU2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Ccdc188F6WEU2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc188F6WEU2 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc188F6WEU2 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc188F6WEU2 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc188F6WEU2 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc188F6WEU2 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc188F6WEU2 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ccdc188F6WEU2 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms