Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm1E9Q9Q2 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm1E9Q9Q2 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm1E9Q9Q2 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm1E9Q9Q2 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm1E9Q9Q2 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC16.25■□□□□ 0.19
R3hdm1E9Q9Q2 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm1E9Q9Q2 Gm27838-201ENSMUST00000184829 128 ntBASIC16.25■□□□□ 0.19
R3hdm1E9Q9Q2 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm1E9Q9Q2 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm1E9Q9Q2 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.25■□□□□ 0.19
R3hdm1E9Q9Q2 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
R3hdm1E9Q9Q2 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm1E9Q9Q2 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm1E9Q9Q2 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm1E9Q9Q2 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm1E9Q9Q2 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
R3hdm1E9Q9Q2 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm1E9Q9Q2 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm1E9Q9Q2 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm1E9Q9Q2 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm1E9Q9Q2 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm1E9Q9Q2 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm1E9Q9Q2 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm1E9Q9Q2 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC16.25■□□□□ 0.19
R3hdm1E9Q9Q2 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
R3hdm1E9Q9Q2 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
R3hdm1E9Q9Q2 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
R3hdm1E9Q9Q2 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
R3hdm1E9Q9Q2 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
R3hdm1E9Q9Q2 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
R3hdm1E9Q9Q2 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
R3hdm1E9Q9Q2 Gm15163-201ENSMUST00000120749 1302 ntBASIC16.24■□□□□ 0.19
R3hdm1E9Q9Q2 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
R3hdm1E9Q9Q2 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
R3hdm1E9Q9Q2 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
R3hdm1E9Q9Q2 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.24■□□□□ 0.19
R3hdm1E9Q9Q2 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
R3hdm1E9Q9Q2 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
R3hdm1E9Q9Q2 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
R3hdm1E9Q9Q2 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
R3hdm1E9Q9Q2 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
R3hdm1E9Q9Q2 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.24■□□□□ 0.19
R3hdm1E9Q9Q2 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
R3hdm1E9Q9Q2 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
R3hdm1E9Q9Q2 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
R3hdm1E9Q9Q2 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
R3hdm1E9Q9Q2 Gm13015-201ENSMUST00000118674 204 ntBASIC16.24■□□□□ 0.19
R3hdm1E9Q9Q2 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
R3hdm1E9Q9Q2 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
R3hdm1E9Q9Q2 Gm18049-201ENSMUST00000208909 581 ntBASIC16.24■□□□□ 0.19
R3hdm1E9Q9Q2 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
R3hdm1E9Q9Q2 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
R3hdm1E9Q9Q2 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
R3hdm1E9Q9Q2 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.24■□□□□ 0.19
R3hdm1E9Q9Q2 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
R3hdm1E9Q9Q2 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
R3hdm1E9Q9Q2 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC16.24■□□□□ 0.19
R3hdm1E9Q9Q2 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.24■□□□□ 0.19
R3hdm1E9Q9Q2 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
R3hdm1E9Q9Q2 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
R3hdm1E9Q9Q2 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
R3hdm1E9Q9Q2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
R3hdm1E9Q9Q2 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
R3hdm1E9Q9Q2 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
R3hdm1E9Q9Q2 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
R3hdm1E9Q9Q2 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
R3hdm1E9Q9Q2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
R3hdm1E9Q9Q2 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
R3hdm1E9Q9Q2 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
R3hdm1E9Q9Q2 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
R3hdm1E9Q9Q2 Gm12859-201ENSMUST00000117834 427 ntBASIC16.23■□□□□ 0.19
R3hdm1E9Q9Q2 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC16.23■□□□□ 0.19
R3hdm1E9Q9Q2 AL593843.1-201ENSMUST00000195891 145 ntBASIC16.23■□□□□ 0.19
R3hdm1E9Q9Q2 Gm6745-201ENSMUST00000199216 526 ntBASIC16.23■□□□□ 0.19
R3hdm1E9Q9Q2 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.23■□□□□ 0.19
R3hdm1E9Q9Q2 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
R3hdm1E9Q9Q2 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
R3hdm1E9Q9Q2 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.23■□□□□ 0.19
R3hdm1E9Q9Q2 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
R3hdm1E9Q9Q2 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
R3hdm1E9Q9Q2 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
R3hdm1E9Q9Q2 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
R3hdm1E9Q9Q2 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
R3hdm1E9Q9Q2 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
R3hdm1E9Q9Q2 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
R3hdm1E9Q9Q2 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.23■□□□□ 0.19
R3hdm1E9Q9Q2 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
R3hdm1E9Q9Q2 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
R3hdm1E9Q9Q2 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
R3hdm1E9Q9Q2 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
R3hdm1E9Q9Q2 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
R3hdm1E9Q9Q2 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.22■□□□□ 0.19
R3hdm1E9Q9Q2 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
R3hdm1E9Q9Q2 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
R3hdm1E9Q9Q2 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
R3hdm1E9Q9Q2 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
R3hdm1E9Q9Q2 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
R3hdm1E9Q9Q2 Gm6912-201ENSMUST00000117218 544 ntBASIC16.22■□□□□ 0.19
R3hdm1E9Q9Q2 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms