Protein–RNA interactions for Protein: E1U8D0

Soga1, Protein SOGA1, mousemouse

Predictions only

Length 1,418 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Soga1E1U8D0 Gm18063-201ENSMUST00000208529 568 ntBASIC22.36■■□□□ 1.17
Soga1E1U8D0 Gm18052-201ENSMUST00000208750 559 ntBASIC22.36■■□□□ 1.17
Soga1E1U8D0 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Soga1E1U8D0 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Soga1E1U8D0 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC22.36■■□□□ 1.17
Soga1E1U8D0 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Soga1E1U8D0 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Soga1E1U8D0 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Soga1E1U8D0 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Soga1E1U8D0 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Soga1E1U8D0 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC22.35■■□□□ 1.17
Soga1E1U8D0 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC22.35■■□□□ 1.17
Soga1E1U8D0 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC22.35■■□□□ 1.17
Soga1E1U8D0 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Soga1E1U8D0 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Soga1E1U8D0 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Soga1E1U8D0 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC22.35■■□□□ 1.17
Soga1E1U8D0 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC22.35■■□□□ 1.17
Soga1E1U8D0 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Soga1E1U8D0 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Soga1E1U8D0 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Soga1E1U8D0 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Soga1E1U8D0 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Soga1E1U8D0 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Soga1E1U8D0 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC22.35■■□□□ 1.17
Soga1E1U8D0 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Soga1E1U8D0 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Soga1E1U8D0 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Soga1E1U8D0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Soga1E1U8D0 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Soga1E1U8D0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Soga1E1U8D0 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Soga1E1U8D0 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC22.34■■□□□ 1.17
Soga1E1U8D0 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC22.34■■□□□ 1.17
Soga1E1U8D0 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Soga1E1U8D0 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Soga1E1U8D0 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC22.34■■□□□ 1.17
Soga1E1U8D0 Mir8109-201ENSMUST00000184375 117 ntBASIC22.34■■□□□ 1.17
Soga1E1U8D0 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Soga1E1U8D0 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Soga1E1U8D0 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC22.34■■□□□ 1.17
Soga1E1U8D0 Gm10461-201ENSMUST00000202073 4786 ntBASIC22.34■■□□□ 1.17
Soga1E1U8D0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Soga1E1U8D0 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Soga1E1U8D0 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC22.33■■□□□ 1.17
Soga1E1U8D0 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC22.33■■□□□ 1.17
Soga1E1U8D0 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Soga1E1U8D0 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC22.33■■□□□ 1.17
Soga1E1U8D0 Gm10012-201ENSMUST00000078252 192 ntBASIC22.33■■□□□ 1.17
Soga1E1U8D0 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Soga1E1U8D0 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Soga1E1U8D0 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Soga1E1U8D0 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Soga1E1U8D0 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
Soga1E1U8D0 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Soga1E1U8D0 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Soga1E1U8D0 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Soga1E1U8D0 Gm13050-201ENSMUST00000122149 1345 ntBASIC22.33■■□□□ 1.16
Soga1E1U8D0 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC22.32■■□□□ 1.16
Soga1E1U8D0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Soga1E1U8D0 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC22.32■■□□□ 1.16
Soga1E1U8D0 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC22.32■■□□□ 1.16
Soga1E1U8D0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Soga1E1U8D0 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Soga1E1U8D0 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Soga1E1U8D0 Gm7553-201ENSMUST00000185805 1426 ntBASIC22.32■■□□□ 1.16
Soga1E1U8D0 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Soga1E1U8D0 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Soga1E1U8D0 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Soga1E1U8D0 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Soga1E1U8D0 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Soga1E1U8D0 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC22.32■■□□□ 1.16
Soga1E1U8D0 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Soga1E1U8D0 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Soga1E1U8D0 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Soga1E1U8D0 Gm17383-201ENSMUST00000078739 1041 ntBASIC22.31■■□□□ 1.16
Soga1E1U8D0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Soga1E1U8D0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Soga1E1U8D0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Soga1E1U8D0 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Soga1E1U8D0 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Soga1E1U8D0 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Soga1E1U8D0 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Soga1E1U8D0 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Soga1E1U8D0 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC22.31■■□□□ 1.16
Soga1E1U8D0 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Soga1E1U8D0 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Soga1E1U8D0 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Soga1E1U8D0 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Soga1E1U8D0 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Soga1E1U8D0 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Soga1E1U8D0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Soga1E1U8D0 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC22.3■■□□□ 1.16
Soga1E1U8D0 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Soga1E1U8D0 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Soga1E1U8D0 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Soga1E1U8D0 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Soga1E1U8D0 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Soga1E1U8D0 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Soga1E1U8D0 Gm10327-201ENSMUST00000105222 1002 ntBASIC22.3■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms