Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Gm13612-201ENSMUST00000119276 390 ntBASIC11□□□□□ -0.65
Col6a5A6H584 Gm15593-201ENSMUST00000122085 1008 ntBASIC11□□□□□ -0.65
Col6a5A6H584 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col6a5A6H584 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11□□□□□ -0.65
Col6a5A6H584 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col6a5A6H584 Gm19078-201ENSMUST00000206311 727 ntBASIC11□□□□□ -0.65
Col6a5A6H584 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11□□□□□ -0.65
Col6a5A6H584 Gm9368-201ENSMUST00000219348 831 ntBASIC11□□□□□ -0.65
Col6a5A6H584 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col6a5A6H584 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a5A6H584 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC11□□□□□ -0.65
Col6a5A6H584 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a5A6H584 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col6a5A6H584 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a5A6H584 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11□□□□□ -0.65
Col6a5A6H584 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a5A6H584 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col6a5A6H584 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Col6a5A6H584 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a5A6H584 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a5A6H584 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a5A6H584 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11□□□□□ -0.65
Col6a5A6H584 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col6a5A6H584 Gm15393-201ENSMUST00000120499 219 ntBASIC11□□□□□ -0.65
Col6a5A6H584 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col6a5A6H584 Gm4804-201ENSMUST00000182234 999 ntBASIC11□□□□□ -0.65
Col6a5A6H584 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Col6a5A6H584 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC11□□□□□ -0.65
Col6a5A6H584 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a5A6H584 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col6a5A6H584 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC11□□□□□ -0.65
Col6a5A6H584 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col6a5A6H584 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a5A6H584 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.99□□□□□ -0.65
Col6a5A6H584 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a5A6H584 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC10.99□□□□□ -0.65
Col6a5A6H584 Dancr-204ENSMUST00000132389 2347 ntBASIC10.99□□□□□ -0.65
Col6a5A6H584 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a5A6H584 Gm11524-201ENSMUST00000119349 807 ntBASIC10.99□□□□□ -0.65
Col6a5A6H584 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC10.99□□□□□ -0.65
Col6a5A6H584 Gm2383-201ENSMUST00000181461 807 ntBASIC10.99□□□□□ -0.65
Col6a5A6H584 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.99□□□□□ -0.65
Col6a5A6H584 Abhd11os-203ENSMUST00000222613 363 ntBASIC10.99□□□□□ -0.65
Col6a5A6H584 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a5A6H584 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Col6a5A6H584 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a5A6H584 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a5A6H584 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC10.99□□□□□ -0.65
Col6a5A6H584 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a5A6H584 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Col6a5A6H584 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a5A6H584 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a5A6H584 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a5A6H584 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC10.99□□□□□ -0.65
Col6a5A6H584 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Col6a5A6H584 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a5A6H584 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a5A6H584 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a5A6H584 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a5A6H584 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Col6a5A6H584 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a5A6H584 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a5A6H584 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a5A6H584 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a5A6H584 Gm4909-201ENSMUST00000118749 794 ntBASIC10.99□□□□□ -0.65
Col6a5A6H584 Gm1335-201ENSMUST00000121653 386 ntBASIC10.99□□□□□ -0.65
Col6a5A6H584 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a5A6H584 Gm27331-201ENSMUST00000183705 60 ntBASIC10.99□□□□□ -0.65
Col6a5A6H584 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a5A6H584 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a5A6H584 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a5A6H584 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Col6a5A6H584 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Col6a5A6H584 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC10.99□□□□□ -0.65
Col6a5A6H584 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC10.99□□□□□ -0.65
Col6a5A6H584 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
Col6a5A6H584 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a5A6H584 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Col6a5A6H584 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Col6a5A6H584 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a5A6H584 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a5A6H584 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a5A6H584 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Col6a5A6H584 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.98□□□□□ -0.65
Col6a5A6H584 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC10.98□□□□□ -0.65
Col6a5A6H584 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC10.98□□□□□ -0.65
Col6a5A6H584 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.98□□□□□ -0.65
Col6a5A6H584 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Col6a5A6H584 CT009718.3-201ENSMUST00000221116 367 ntBASIC10.98□□□□□ -0.65
Col6a5A6H584 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a5A6H584 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.98□□□□□ -0.65
Col6a5A6H584 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a5A6H584 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a5A6H584 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a5A6H584 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a5A6H584 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a5A6H584 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a5A6H584 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a5A6H584 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col6a5A6H584 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms